Orthogroup:group_1130



Homologs in group_1130

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7 homologs were identified in 7 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Source Gene Product
FBDBKF_06450 FBDBKF_06450 Morganella morganii S1 ileS isoleucine--tRNA ligase
EHELCC_09495 EHELCC_09495 Morganella morganii S2 ileS isoleucine--tRNA ligase
NLDBIP_09875 NLDBIP_09875 Morganella morganii S4 ileS isoleucine--tRNA ligase
LHKJJB_07880 LHKJJB_07880 Morganella morganii S3 ileS isoleucine--tRNA ligase
HKOGLL_07430 HKOGLL_07430 Morganella morganii S5 ileS isoleucine--tRNA ligase
F4V73_RS15475 F4V73_RS15475 Morganella psychrotolerans ileS isoleucine--tRNA ligase
PMI_RS00075 PMI_RS00075 Proteus mirabilis HI4320 ileS isoleucine--tRNA ligase

Distribution of group_1130 homologs

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Number of homologs in each genome (first column and blue bar chart)

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Phylogeny of group_1130 (midpoint rooted)


Phylogeny of the RefSeq best hits of group_1130

Orthogroup content: 7 members

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This page summarizes the annotation of all members of the orthologous group group_1130.
Gene name(s), gene product(s), a summary of protein lenght, and annotations (when available) are provided. Additionally, the number of times (occurence) an annotation is observed in the orthogroup is reported for each annotation.

Orthologs were identified with OrthoFinder. The annotation of orthologous proteins can differ depending the approach used to annotate the source genomes. Automated annotations are also subject to errors. Spurious clustering of non-orthologous proteins can also happen. This page allows to check for eventual inconsistencies.

Gene

# Gene name Occurence
1 ileS 7

Product

# Product Occurence
1 isoleucine--tRNA ligase 7

COG entry Annotation(s)

ID Occurences Function(s) cat. Function(s) descr. Description
COG0060 7 J Translation, ribosomal structure and biogenesis (J) Isoleucyl-tRNA synthetase

Kegg Ortholog Annotation(s)

KO Occurences Description Pathways Modules
K01870 7 isoleucyl-tRNA synthetase [EC:6.1.1.5] Aminoacyl-tRNA biosynthesis -

Pfam domain Annotation(s)

Domain ID Occurences Description
PF00133 7 tRNA synthetases class I (I, L, M and V)
PF06827 7 Zinc finger found in FPG and IleRS
PF08264 7 Anticodon-binding domain of tRNA ligase

Annotations of the 508 SwissProt hits

Annotation Number of occurrences
Isoleucine--tRNA ligase 480
Isoleucine--tRNA ligase (Fragment) 1
Isoleucine--tRNA ligase 1 9
Isoleucine--tRNA ligase 2 9
Isoleucine--tRNA ligase, chloroplastic/mitochondrial 1
Isoleucine--tRNA ligase, mitochondrial 5
Isoleucine--tRNA ligase, mitochondrial (Fragment) 1
Probable isoleucine--tRNA ligase, cytoplasmic 1
Probable isoleucine--tRNA ligase, mitochondrial 1

Protein length

Min length 936
Max length 937
Mean length (sd) 936.9 (0.4)
Median length 937.0

Protein length distribution