PF00529


Help to interpret the results

Three outputs have been generated:
General: this result contains the description and frequency of the selected Pfam domains PF00529, of which KO pathways and KO modules it is part. Additionally, its occurence in the database is reported.
Proteins list: list of occurences of the Pfam domains within the database. 27 occurences are identified. The table reports the orthogroup, the organism in which each occurrence has been found, and the locus tag enriched by start and stop position, strand, gene name and product.
Clicking on the Ortohgroup name or locus you will be redirected to further info.
Profiles: Phylogenetic tree annotated with
- the presence of the Pfam domain(s) of interest within all the genomes of the database (first column)
- the size of the orthogroup(s) in which the reported Pfam domains has been clustered.
In red the Pfam domains with positive hit(s) in the corresponding genome.
In green the discrepencies between orthogroup clustering and Pfam domains prediction. Green homologs (same orthogroup) are not positive hit(s) for the considered Pfam domains.

Variations within orthogroups may be due to the clustering of multi domain proteins or because of erroneous homolog clustering or Pfam domains prediction.

Description

External link PF00529
Description Cation efflux system protein CusB domain 1

Occurence in the database

PF00529 is associated with 27 different proteins (see tab "Protein list" and "Profile")
The 27 proteins are classified into 4 different orthogroup(s)
# Orthogroup Locus Start Stop S. Gene Product Organism
0 group_43 FBDBKF_04605 120141 121331 -1 emrA Multidrug resistance efflux pump EmrA Morganella morganii S1
1 group_2673 FBDBKF_04875 182010 183296 -1 emrA Multidrug resistance efflux pump EmrA Morganella morganii S1
2 group_43 FBDBKF_10185 129194 130372 1 emrA multidrug efflux MFS transporter periplasmic adaptor subunit EmrA Morganella morganii S1
3 group_166 FBDBKF_15970 46728 47924 -1 acrA Multidrug efflux pump subunit AcrA (membrane-fusion protein) Morganella morganii S1
4 group_43 EHELCC_04985 321159 322337 1 emrA multidrug efflux MFS transporter periplasmic adaptor subunit EmrA Morganella morganii S2
5 group_43 EHELCC_05895 179598 180788 -1 emrA Multidrug resistance efflux pump EmrA Morganella morganii S2
6 group_2673 EHELCC_06165 241467 242753 -1 emrA Multidrug resistance efflux pump EmrA Morganella morganii S2
7 group_166 EHELCC_18575 4162 5358 -1 acrA Multidrug efflux pump subunit AcrA (membrane-fusion protein) Morganella morganii S2
8 group_43 NLDBIP_04985 320955 322133 1 emrA multidrug efflux MFS transporter periplasmic adaptor subunit EmrA Morganella morganii S4
9 group_43 NLDBIP_06215 220663 221853 -1 emrA Multidrug resistance efflux pump EmrA Morganella morganii S4
10 group_2673 NLDBIP_06485 282532 283818 -1 emrA Multidrug resistance efflux pump EmrA Morganella morganii S4
11 group_166 NLDBIP_17405 34167 35363 -1 acrA Multidrug efflux pump subunit AcrA (membrane-fusion protein) Morganella morganii S4
12 group_43 LHKJJB_03095 198187 199377 -1 emrA Multidrug resistance efflux pump EmrA Morganella morganii S3
13 group_2673 LHKJJB_03365 260056 261342 -1 emrA Multidrug resistance efflux pump EmrA Morganella morganii S3
14 group_43 LHKJJB_13645 13245 14423 -1 emrA multidrug efflux MFS transporter periplasmic adaptor subunit EmrA Morganella morganii S3
15 group_166 LHKJJB_17255 20825 22021 1 acrA Multidrug efflux pump subunit AcrA (membrane-fusion protein) Morganella morganii S3
16 group_43 HKOGLL_06570 120051 121241 -1 emrA Multidrug resistance efflux pump EmrA Morganella morganii S5
17 group_2673 HKOGLL_06840 181920 183206 -1 emrA Multidrug resistance efflux pump EmrA Morganella morganii S5
18 group_43 HKOGLL_12890 129975 131153 1 emrA multidrug efflux MFS transporter periplasmic adaptor subunit EmrA Morganella morganii S5
19 group_166 HKOGLL_17140 34167 35363 -1 acrA Multidrug efflux pump subunit AcrA (membrane-fusion protein) Morganella morganii S5
20 group_43 F4V73_RS00155 40719 41897 -1 emrA multidrug efflux MFS transporter periplasmic adaptor subunit EmrA Morganella psychrotolerans
21 group_43 F4V73_RS09055 1893555 1894745 -1 EmrA/EmrK family multidrug efflux transporter periplasmic adaptor subunit Morganella psychrotolerans
22 group_166 F4V73_RS16340 82431 83624 1 efflux RND transporter periplasmic adaptor subunit Morganella psychrotolerans
23 group_166 PMI_RS00640 165050 166240 -1 efflux RND transporter periplasmic adaptor subunit Proteus mirabilis HI4320
24 group_1305 PMI_RS01345 325713 327038 -1 HlyD family type I secretion periplasmic adaptor subunit Proteus mirabilis HI4320
25 group_43 PMI_RS01985 468236 469411 -1 emrA multidrug efflux MFS transporter periplasmic adaptor subunit EmrA Proteus mirabilis HI4320
26 group_43 PMI_RS15260 3385691 3386791 1 HlyD family secretion protein Proteus mirabilis HI4320