PF00480


Help to interpret the results

Three outputs have been generated:
General: this result contains the description and frequency of the selected Pfam domains PF00480, of which KO pathways and KO modules it is part. Additionally, its occurence in the database is reported.
Proteins list: list of occurences of the Pfam domains within the database. 40 occurences are identified. The table reports the orthogroup, the organism in which each occurrence has been found, and the locus tag enriched by start and stop position, strand, gene name and product.
Clicking on the Ortohgroup name or locus you will be redirected to further info.
Profiles: Phylogenetic tree annotated with
- the presence of the Pfam domain(s) of interest within all the genomes of the database (first column)
- the size of the orthogroup(s) in which the reported Pfam domains has been clustered.
In red the Pfam domains with positive hit(s) in the corresponding genome.
In green the discrepencies between orthogroup clustering and Pfam domains prediction. Green homologs (same orthogroup) are not positive hit(s) for the considered Pfam domains.

Variations within orthogroups may be due to the clustering of multi domain proteins or because of erroneous homolog clustering or Pfam domains prediction.

Description

External link PF00480
Description ROK family

Occurence in the database

PF00480 is associated with 40 different proteins (see tab "Protein list" and "Profile")
The 40 proteins are classified into 6 different orthogroup(s)
# Orthogroup Locus Start Stop S. Gene Product Organism
0 group_697 FBDBKF_02970 287278 288477 -1 nagC Sugar kinase of the NBD/HSP70 family, may contain an N-terminal HTH domain Morganella morganii S1
1 group_330 FBDBKF_09930 83047 84282 1 nagC Sugar kinase of the NBD/HSP70 family, may contain an N-terminal HTH domain Morganella morganii S1
2 group_2916 FBDBKF_13740 40636 41844 1 nagC Sugar kinase of the NBD/HSP70 family, may contain an N-terminal HTH domain Morganella morganii S1
3 group_2943 FBDBKF_14955 4359 5228 -1 nagC Sugar kinase of the NBD/HSP70 family, may contain an N-terminal HTH domain Morganella morganii S1
4 group_2076 FBDBKF_15535 33385 34296 -1 nagK N-acetylglucosamine kinase Morganella morganii S1
5 group_2997 FBDBKF_17455 25508 26416 -1 mak fructokinase Morganella morganii S1
6 group_697 EHELCC_03440 675098 676297 -1 nagC Sugar kinase of the NBD/HSP70 family, may contain an N-terminal HTH domain Morganella morganii S2
7 group_330 EHELCC_04730 275012 276247 1 nagC Sugar kinase of the NBD/HSP70 family, may contain an N-terminal HTH domain Morganella morganii S2
8 group_2943 EHELCC_11290 79678 80547 1 nagC Sugar kinase of the NBD/HSP70 family, may contain an N-terminal HTH domain Morganella morganii S2
9 group_2916 EHELCC_11410 125512 126720 1 nagC Sugar kinase of the NBD/HSP70 family, may contain an N-terminal HTH domain Morganella morganii S2
10 group_2076 EHELCC_15895 32685 33596 -1 nagK N-acetylglucosamine kinase Morganella morganii S2
11 group_2997 EHELCC_17350 25508 26416 -1 mak fructokinase Morganella morganii S2
12 group_697 NLDBIP_00020 3839 5038 1 nagC Sugar kinase of the NBD/HSP70 family, may contain an N-terminal HTH domain Morganella morganii S4
13 group_330 NLDBIP_04730 274808 276043 1 nagC Sugar kinase of the NBD/HSP70 family, may contain an N-terminal HTH domain Morganella morganii S4
14 group_2943 NLDBIP_11635 79678 80547 1 nagC Sugar kinase of the NBD/HSP70 family, may contain an N-terminal HTH domain Morganella morganii S4
15 group_2916 NLDBIP_11755 125512 126720 1 nagC Sugar kinase of the NBD/HSP70 family, may contain an N-terminal HTH domain Morganella morganii S4
16 group_2076 NLDBIP_16475 47067 47978 1 nagK N-acetylglucosamine kinase Morganella morganii S4
17 group_2997 NLDBIP_17845 16380 17288 1 mak fructokinase Morganella morganii S4
18 group_697 LHKJJB_02015 387647 388846 -1 nagC Sugar kinase of the NBD/HSP70 family, may contain an N-terminal HTH domain Morganella morganii S3
19 group_2943 LHKJJB_11495 79678 80547 1 nagC Sugar kinase of the NBD/HSP70 family, may contain an N-terminal HTH domain Morganella morganii S3
20 group_2916 LHKJJB_11615 125512 126720 1 nagC Sugar kinase of the NBD/HSP70 family, may contain an N-terminal HTH domain Morganella morganii S3
21 group_330 LHKJJB_13900 59335 60570 -1 nagC Sugar kinase of the NBD/HSP70 family, may contain an N-terminal HTH domain Morganella morganii S3
22 group_2076 LHKJJB_16330 32685 33596 -1 nagK N-acetylglucosamine kinase Morganella morganii S3
23 group_2997 LHKJJB_17765 16378 17286 1 mak fructokinase Morganella morganii S3
24 group_697 HKOGLL_02055 393158 394357 -1 nagC Sugar kinase of the NBD/HSP70 family, may contain an N-terminal HTH domain Morganella morganii S5
25 group_2943 HKOGLL_10105 79678 80547 1 nagC Sugar kinase of the NBD/HSP70 family, may contain an N-terminal HTH domain Morganella morganii S5
26 group_2916 HKOGLL_10225 125512 126720 1 nagC Sugar kinase of the NBD/HSP70 family, may contain an N-terminal HTH domain Morganella morganii S5
27 group_330 HKOGLL_12635 83828 85063 1 nagC Sugar kinase of the NBD/HSP70 family, may contain an N-terminal HTH domain Morganella morganii S5
28 group_2076 HKOGLL_16100 32685 33596 -1 nagK N-acetylglucosamine kinase Morganella morganii S5
29 group_2997 HKOGLL_17775 16378 17286 1 mak fructokinase Morganella morganii S5
30 group_330 F4V73_RS00420 88341 89576 -1 ROK family protein Morganella psychrotolerans
31 group_330 F4V73_RS04920 1044658 1045818 -1 ROK family protein Morganella psychrotolerans
32 group_697 F4V73_RS05410 1147401 1148600 -1 ROK family protein Morganella psychrotolerans
33 group_2916 F4V73_RS12610 118472 119680 1 ROK family protein Morganella psychrotolerans
34 group_2997 F4V73_RS16630 149366 150274 -1 mak fructokinase Morganella psychrotolerans
35 group_2076 F4V73_RS17615 161732 162643 1 nagK N-acetylglucosamine kinase Morganella psychrotolerans
36 group_330 PMI_RS02265 521124 522356 -1 N-acetylglucosamine repressor Proteus mirabilis HI4320
37 group_697 PMI_RS06235 1364798 1366009 -1 ROK family protein Proteus mirabilis HI4320
38 group_2943 PMI_RS14720 3263834 3264703 -1 N-acetylmannosamine kinase Proteus mirabilis HI4320
39 group_2076 PMI_RS15320 3397402 3398313 -1 nagK N-acetylglucosamine kinase Proteus mirabilis HI4320