PF00480

Help to interpret the results

Three outputs have been generated:
General: this tab contains the description, occurence in the database and other information related to the selected Pfam domain PF00480
Protein list: lists the 40 occurences of the Pfam domain within the database. The table reports information on each occurence.
Profile: phylogenetic tree annotated with
- the presence of the Pfam domain of interest within all the genomes of the database (first column)
- the size of the orthogroup(s) in which the reported Pfam domain has been clustered.
Orthogroups are shown in red if they are annotated with that particular Pfam domain in a given genome , in green otherwise, i.e. if there is a discrepency between orthogroup clustering and Pfam domain prediction.
Green homologs (same orthogroup) are not positive hit(s) for the considered Pfam domain.
Variations within orthogroups may be due to the clustering of multi domain proteins or because of erroneous homolog clustering or Pfam domain prediction.

Description

External link PF00480
Description ROK family

Occurence in the database

PF00480 is associated with 40 different proteins
The 40 proteins are classified into 7 different orthogroup(s)
Orthogroup Locus Start Stop S. Gene Product Organism
0 group_454 FBDBKF_02970 287278 288477 -1 nagC Sugar kinase of the NBD/HSP70 family, may contain an N-terminal HTH domain Morganella morganii S1
1 group_455 FBDBKF_09930 83047 84282 1 nagC Sugar kinase of the NBD/HSP70 family, may contain an N-terminal HTH domain Morganella morganii S1
2 group_2931 FBDBKF_13740 40636 41844 1 nagC Sugar kinase of the NBD/HSP70 family, may contain an N-terminal HTH domain Morganella morganii S1
3 group_2957 FBDBKF_14955 4359 5228 -1 nagC Sugar kinase of the NBD/HSP70 family, may contain an N-terminal HTH domain Morganella morganii S1
4 group_2115 FBDBKF_15535 33385 34296 -1 nagK N-acetylglucosamine kinase Morganella morganii S1
5 group_3004 FBDBKF_17455 25508 26416 -1 mak fructokinase Morganella morganii S1
6 group_454 EHELCC_03440 675098 676297 -1 nagC Sugar kinase of the NBD/HSP70 family, may contain an N-terminal HTH domain Morganella morganii S2
7 group_455 EHELCC_04730 275012 276247 1 nagC Sugar kinase of the NBD/HSP70 family, may contain an N-terminal HTH domain Morganella morganii S2
8 group_2957 EHELCC_11290 79678 80547 1 nagC Sugar kinase of the NBD/HSP70 family, may contain an N-terminal HTH domain Morganella morganii S2
9 group_2931 EHELCC_11410 125512 126720 1 nagC Sugar kinase of the NBD/HSP70 family, may contain an N-terminal HTH domain Morganella morganii S2
10 group_2115 EHELCC_15895 32685 33596 -1 nagK N-acetylglucosamine kinase Morganella morganii S2
11 group_3004 EHELCC_17350 25508 26416 -1 mak fructokinase Morganella morganii S2
12 group_454 NLDBIP_00020 3839 5038 1 nagC Sugar kinase of the NBD/HSP70 family, may contain an N-terminal HTH domain Morganella morganii S4
13 group_455 NLDBIP_04730 274808 276043 1 nagC Sugar kinase of the NBD/HSP70 family, may contain an N-terminal HTH domain Morganella morganii S4
14 group_2957 NLDBIP_11635 79678 80547 1 nagC Sugar kinase of the NBD/HSP70 family, may contain an N-terminal HTH domain Morganella morganii S4
15 group_2931 NLDBIP_11755 125512 126720 1 nagC Sugar kinase of the NBD/HSP70 family, may contain an N-terminal HTH domain Morganella morganii S4
16 group_2115 NLDBIP_16475 47067 47978 1 nagK N-acetylglucosamine kinase Morganella morganii S4
17 group_3004 NLDBIP_17845 16380 17288 1 mak fructokinase Morganella morganii S4
18 group_454 LHKJJB_02015 387647 388846 -1 nagC Sugar kinase of the NBD/HSP70 family, may contain an N-terminal HTH domain Morganella morganii S3
19 group_2957 LHKJJB_11495 79678 80547 1 nagC Sugar kinase of the NBD/HSP70 family, may contain an N-terminal HTH domain Morganella morganii S3
20 group_2931 LHKJJB_11615 125512 126720 1 nagC Sugar kinase of the NBD/HSP70 family, may contain an N-terminal HTH domain Morganella morganii S3
21 group_455 LHKJJB_13900 59335 60570 -1 nagC Sugar kinase of the NBD/HSP70 family, may contain an N-terminal HTH domain Morganella morganii S3
22 group_2115 LHKJJB_16330 32685 33596 -1 nagK N-acetylglucosamine kinase Morganella morganii S3
23 group_3004 LHKJJB_17765 16378 17286 1 mak fructokinase Morganella morganii S3
24 group_454 HKOGLL_02055 393158 394357 -1 nagC Sugar kinase of the NBD/HSP70 family, may contain an N-terminal HTH domain Morganella morganii S5
25 group_2957 HKOGLL_10105 79678 80547 1 nagC Sugar kinase of the NBD/HSP70 family, may contain an N-terminal HTH domain Morganella morganii S5
26 group_2931 HKOGLL_10225 125512 126720 1 nagC Sugar kinase of the NBD/HSP70 family, may contain an N-terminal HTH domain Morganella morganii S5
27 group_455 HKOGLL_12635 83828 85063 1 nagC Sugar kinase of the NBD/HSP70 family, may contain an N-terminal HTH domain Morganella morganii S5
28 group_2115 HKOGLL_16100 32685 33596 -1 nagK N-acetylglucosamine kinase Morganella morganii S5
29 group_3004 HKOGLL_17775 16378 17286 1 mak fructokinase Morganella morganii S5
30 group_455 F4V73_RS00420 88341 89576 -1 ROK family protein Morganella psychrotolerans
31 group_4318 F4V73_RS04920 1044658 1045818 -1 ROK family protein Morganella psychrotolerans
32 group_454 F4V73_RS05410 1147401 1148600 -1 ROK family protein Morganella psychrotolerans
33 group_2931 F4V73_RS12610 118472 119680 1 ROK family protein Morganella psychrotolerans
34 group_3004 F4V73_RS16630 149366 150274 -1 mak fructokinase Morganella psychrotolerans
35 group_2115 F4V73_RS17615 161732 162643 1 nagK N-acetylglucosamine kinase Morganella psychrotolerans
36 group_455 PMI_RS02265 521124 522356 -1 N-acetylglucosamine repressor Proteus mirabilis HI4320
37 group_454 PMI_RS06235 1364798 1366009 -1 ROK family protein Proteus mirabilis HI4320
38 group_2957 PMI_RS14720 3263834 3264703 -1 N-acetylmannosamine kinase Proteus mirabilis HI4320
39 group_2115 PMI_RS15320 3397402 3398313 -1 nagK N-acetylglucosamine kinase Proteus mirabilis HI4320