Homologs in group_330

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7 homologs were identified in 7 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product
FBDBKF_09930 FBDBKF_09930 24.8 Morganella morganii S1 nagC Sugar kinase of the NBD/HSP70 family, may contain an N-terminal HTH domain
EHELCC_04730 EHELCC_04730 24.8 Morganella morganii S2 nagC Sugar kinase of the NBD/HSP70 family, may contain an N-terminal HTH domain
NLDBIP_04730 NLDBIP_04730 24.8 Morganella morganii S4 nagC Sugar kinase of the NBD/HSP70 family, may contain an N-terminal HTH domain
LHKJJB_13900 LHKJJB_13900 24.8 Morganella morganii S3 nagC Sugar kinase of the NBD/HSP70 family, may contain an N-terminal HTH domain
HKOGLL_12635 HKOGLL_12635 24.8 Morganella morganii S5 nagC Sugar kinase of the NBD/HSP70 family, may contain an N-terminal HTH domain
F4V73_RS00420 F4V73_RS00420 25.7 Morganella psychrotolerans - ROK family protein
PMI_RS02265 PMI_RS02265 27.1 Proteus mirabilis HI4320 - N-acetylglucosamine repressor

Distribution of the homologs in the orthogroup group_330

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Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

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Phylogeny of the RefSeq best hits of group_330

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism
P50456 1.02e-05 50 21 11 369 1 mlc DNA-binding transcriptional repressor Mlc Escherichia coli (strain K12)
P0AF23 8.73e-05 48 22 13 363 3 nagC N-acetylglucosamine repressor Shigella flexneri
P0AF20 8.73e-05 48 22 13 363 2 nagC N-acetylglucosamine repressor Escherichia coli (strain K12)
P0AF21 8.73e-05 48 22 13 363 3 nagC N-acetylglucosamine repressor Escherichia coli O6:H1 (strain CFT073 / ATCC 700928 / UPEC)
P0AF22 8.73e-05 48 22 13 363 3 nagC N-acetylglucosamine repressor Escherichia coli O157:H7

  • Number of RefSeq hits:

General

Source Morganella psychrotolerans
Locus tag F4V73_RS04920
Feature type CDS
Gene -
Product ROK family protein
Location 1044658 - 1045818 (strand: -1)
Length 1161 (nucleotides) / 386 (amino acids)

Contig

Accession term accessions NZ_VXKB01000001 accessions NZ_VXKB01000000 Name: value, dtype: object
Length 2012992 nucleotides
Topology linear
Plasmid False

Orthology

Orthogroup group_330
Orthogroup size 8
N. genomes 7

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Genomic region

Domains

PF00480 ROK family

COG entry Annotation(s)

ID Function(s) descr. Function(s) cat. Description
COG1940 Carbohydrate transport and metabolism (G)
Transcription (K)		 GK Sugar kinase of the NBD/HSP70 family, may contain an N-terminal HTH domain

Protein Sequence

MVKTSLSSERRQHLFRQILSGYKDQEIVTRKGLAIRNNLRPATVTQLIGEMIQSGLIIDDTINHQPGPGRPEVGIIPNLRQLTAIFICIDARNIIASLVDIRGIVLSSLNQSLPDDNVGSEVLLTCLRKLISQLLNNCLSDTCIQGIIISLPGVIDAKLSHWLYTNRWPKARHTNLSLLETEFAIPVCLVKNLQAELNAFILENHDLATKRVLYVHWGEGIGAASYSKQQINANQQGLFGELGQLTQGDDRTIEQMLSLSALRGTLNEALPGDLSNERAAAKALKDADITVLPCLNNAVSTWSRVLANIYFILFPDVIIFSGPFTHNDALFNGIIDGFNQRVPDYFEQNVIFTINHKSFTNEMNGALSPFFEKLVTKYCQDDCAVL

Flanking regions ( +/- flanking 50bp)

AGCTGAAAATCAGAGTGTTCCCTATCCTTTATCCGGAAAAATAAACAACTATGGTGAAAACCTCTCTTTCGTCAGAACGCAGGCAGCATCTGTTCCGGCAGATTTTATCCGGATATAAAGATCAGGAAATCGTGACCCGCAAAGGGCTGGCAATACGTAACAATCTGCGCCCGGCGACCGTGACACAACTGATCGGTGAAATGATTCAGAGCGGACTTATCATTGACGATACTATTAATCACCAGCCCGGACCCGGACGACCGGAAGTGGGTATTATTCCGAACCTCAGGCAACTGACCGCTATTTTTATCTGTATTGATGCCCGTAATATTATTGCCTCGCTGGTGGATATCAGAGGGATCGTGCTTTCCTCACTGAATCAGTCGTTACCCGACGACAATGTCGGCAGTGAGGTATTGCTGACGTGCCTGCGGAAACTGATCAGTCAGTTACTGAATAATTGCCTGTCGGATACCTGTATTCAGGGAATTATTATTTCTCTGCCCGGGGTCATTGATGCGAAGCTGAGCCACTGGCTTTACACTAATCGCTGGCCAAAAGCGCGCCATACCAATCTCTCTTTGCTGGAGACAGAATTTGCAATTCCGGTATGCCTGGTCAAAAATTTGCAGGCGGAATTAAATGCATTTATCCTGGAAAATCATGACCTGGCAACAAAACGGGTTCTCTATGTTCACTGGGGGGAAGGGATAGGTGCGGCAAGTTATTCAAAACAGCAAATTAATGCCAATCAGCAGGGATTATTCGGCGAGCTGGGGCAACTGACACAGGGAGATGACCGGACAATTGAGCAAATGTTGTCACTTTCTGCGTTACGCGGGACATTGAATGAGGCATTACCCGGGGATTTAAGTAATGAGCGGGCAGCCGCAAAAGCACTCAAAGATGCCGATATTACTGTATTACCTTGTCTGAATAATGCGGTCAGCACCTGGAGCCGTGTTCTTGCCAATATTTATTTTATTCTTTTCCCTGATGTGATTATTTTTTCTGGTCCGTTTACACACAATGATGCCTTATTTAACGGGATTATTGACGGATTTAACCAACGCGTACCGGACTATTTTGAACAAAATGTTATCTTCACCATTAACCATAAATCGTTTACTAATGAAATGAATGGCGCACTCTCACCATTTTTTGAAAAATTAGTGACGAAATATTGTCAGGATGATTGCGCAGTATTATGAGGCTGATGAAAACACATGATTTACAGAAATAAAAATGTCCCGGAACTTAT