PF00370


Help to interpret the results

Three outputs have been generated:
General: this result contains the description and frequency of the selected Pfam domains PF00370, of which KO pathways and KO modules it is part. Additionally, its occurence in the database is reported.
Proteins list: list of occurences of the Pfam domains within the database. 27 occurences are identified. The table reports the orthogroup, the organism in which each occurrence has been found, and the locus tag enriched by start and stop position, strand, gene name and product.
Clicking on the Ortohgroup name or locus you will be redirected to further info.
Profiles: Phylogenetic tree annotated with
- the presence of the Pfam domain(s) of interest within all the genomes of the database (first column)
- the size of the orthogroup(s) in which the reported Pfam domains has been clustered.
In red the Pfam domains with positive hit(s) in the corresponding genome.
In green the discrepencies between orthogroup clustering and Pfam domains prediction. Green homologs (same orthogroup) are not positive hit(s) for the considered Pfam domains.

Variations within orthogroups may be due to the clustering of multi domain proteins or because of erroneous homolog clustering or Pfam domains prediction.

Description

External link PF00370
Description FGGY family of carbohydrate kinases, N-terminal domain

Occurence in the database

PF00370 is associated with 27 different proteins (see tab "Protein list" and "Profile")
The 27 proteins are classified into 4 different orthogroup(s)
# Orthogroup Locus Start Stop S. Gene Product Organism
0 group_603 FBDBKF_01840 54572 56206 -1 araB Ribulose kinase Morganella morganii S1
1 group_2522 FBDBKF_02200 129719 131314 1 lsrK autoinducer-2 kinase Morganella morganii S1
2 group_897 FBDBKF_04695 140731 142242 1 xylB xylulokinase Morganella morganii S1
3 group_1764 FBDBKF_12275 115138 116664 1 glpK glycerol kinase GlpK Morganella morganii S1
4 group_603 EHELCC_02310 442392 444026 -1 araB Ribulose kinase Morganella morganii S2
5 group_2522 EHELCC_02670 517539 519134 1 lsrK autoinducer-2 kinase Morganella morganii S2
6 group_897 EHELCC_05985 200188 201699 1 xylB xylulokinase Morganella morganii S2
7 group_1764 EHELCC_14030 18041 19567 -1 glpK glycerol kinase GlpK Morganella morganii S2
8 group_2522 NLDBIP_00790 161002 162597 -1 lsrK autoinducer-2 kinase Morganella morganii S4
9 group_603 NLDBIP_01150 236110 237744 1 araB Ribulose kinase Morganella morganii S4
10 group_897 NLDBIP_06305 241253 242764 1 xylB xylulokinase Morganella morganii S4
11 group_1764 NLDBIP_15125 21978 23504 -1 glpK glycerol kinase GlpK Morganella morganii S4
12 group_603 LHKJJB_00885 154941 156575 -1 araB Ribulose kinase Morganella morganii S3
13 group_2522 LHKJJB_01245 230088 231683 1 lsrK autoinducer-2 kinase Morganella morganii S3
14 group_897 LHKJJB_03185 218777 220288 1 xylB xylulokinase Morganella morganii S3
15 group_1764 LHKJJB_15485 115138 116664 1 glpK glycerol kinase GlpK Morganella morganii S3
16 group_603 HKOGLL_00925 160452 162086 -1 araB Ribulose kinase Morganella morganii S5
17 group_2522 HKOGLL_01285 235599 237194 1 lsrK autoinducer-2 kinase Morganella morganii S5
18 group_897 HKOGLL_06660 140641 142152 1 xylB xylulokinase Morganella morganii S5
19 group_1764 HKOGLL_14605 101801 103327 1 glpK glycerol kinase GlpK Morganella morganii S5
20 group_603 F4V73_RS04185 884416 886050 -1 FGGY-family carbohydrate kinase Morganella psychrotolerans
21 group_2522 F4V73_RS04570 966411 968003 1 lsrK autoinducer-2 kinase Morganella psychrotolerans
22 group_897 F4V73_RS09170 1919472 1920983 1 xylB xylulokinase Morganella psychrotolerans
23 group_1764 F4V73_RS17105 49176 50702 1 glpK glycerol kinase GlpK Morganella psychrotolerans
24 group_897 PMI_RS06145 1347291 1348745 -1 xylB xylulokinase Proteus mirabilis HI4320
25 group_603 PMI_RS14540 3224012 3225598 -1 FGGY-family carbohydrate kinase Proteus mirabilis HI4320
26 group_1764 PMI_RS15875 3524383 3525915 -1 glpK glycerol kinase GlpK Proteus mirabilis HI4320