Help to interpret the results
Three outputs have been generated:
General: this result contains the description and frequency of the selected Pfam domains PF00226, of which KO pathways and KO modules it is part. Additionally, its occurence in the database is reported.
Proteins list: list of occurences of the Pfam domains
within the database. 23 occurences are identified.
The table reports the orthogroup, the organism in which each occurrence has been found, and the locus tag enriched by start and stop position, strand, gene name and product.
Clicking on the Ortohgroup name or locus you will be redirected to further info.
Profiles: Phylogenetic tree annotated with
- the presence of the Pfam domain(s) of interest within all the genomes of the database (first column)
- the size of the orthogroup(s) in which the reported Pfam domains has been clustered.
In red the Pfam domains with positive hit(s) in the corresponding genome.
In green the discrepencies between orthogroup clustering and Pfam domains prediction.
Green homologs (same orthogroup) are not positive hit(s) for the considered Pfam domains.
Variations within orthogroups may be due to the clustering of multi domain proteins or because of erroneous homolog clustering or Pfam domains prediction.
Description
External link | PF00226 |
---|---|
Description | DnaJ domain |
Occurence in the database
PF00226 is associated with 23 different proteins (see tab "Protein list" and "Profile") |
The 23 proteins are classified into 3 different orthogroup(s) |
# | Orthogroup | Locus | Start | Stop | S. | Gene | Product | Organism |
---|---|---|---|---|---|---|---|---|
0 | group_523 | FBDBKF_01120 | 209360 | 209878 | -1 | hscB | co-chaperone HscB | Morganella morganii S1 |
1 | group_1097 | FBDBKF_06245 | 80793 | 81614 | -1 | djlA | co-chaperone DjlA | Morganella morganii S1 |
2 | group_182 | FBDBKF_06485 | 135651 | 136796 | -1 | dnaJ | molecular chaperone DnaJ | Morganella morganii S1 |
3 | group_523 | EHELCC_00425 | 98990 | 99508 | 1 | hscB | co-chaperone HscB | Morganella morganii S2 |
4 | group_1097 | EHELCC_09290 | 81365 | 82186 | -1 | djlA | co-chaperone DjlA | Morganella morganii S2 |
5 | group_182 | EHELCC_09530 | 136223 | 137368 | -1 | dnaJ | molecular chaperone DnaJ | Morganella morganii S2 |
6 | group_523 | NLDBIP_03035 | 580628 | 581146 | -1 | hscB | co-chaperone HscB | Morganella morganii S4 |
7 | group_1097 | NLDBIP_09670 | 81365 | 82186 | -1 | djlA | co-chaperone DjlA | Morganella morganii S4 |
8 | group_182 | NLDBIP_09910 | 136223 | 137368 | -1 | dnaJ | molecular chaperone DnaJ | Morganella morganii S4 |
9 | group_523 | LHKJJB_04550 | 187869 | 188387 | -1 | hscB | co-chaperone HscB | Morganella morganii S3 |
10 | group_182 | LHKJJB_07845 | 79870 | 81015 | 1 | dnaJ | molecular chaperone DnaJ | Morganella morganii S3 |
11 | group_1097 | LHKJJB_08085 | 135052 | 135873 | 1 | djlA | co-chaperone DjlA | Morganella morganii S3 |
12 | group_523 | HKOGLL_02495 | 99195 | 99713 | 1 | hscB | co-chaperone HscB | Morganella morganii S5 |
13 | group_182 | HKOGLL_07395 | 79870 | 81015 | 1 | dnaJ | molecular chaperone DnaJ | Morganella morganii S5 |
14 | group_1097 | HKOGLL_07635 | 135052 | 135873 | 1 | djlA | co-chaperone DjlA | Morganella morganii S5 |
15 | group_523 | F4V73_RS07190 | 1497334 | 1497852 | -1 | hscB | co-chaperone HscB | Morganella psychrotolerans |
16 | group_182 | F4V73_RS15445 | 76957 | 78096 | 1 | dnaJ | molecular chaperone DnaJ | Morganella psychrotolerans |
17 | group_1097 | F4V73_RS15675 | 132602 | 133420 | 1 | djlA | co-chaperone DjlA | Morganella psychrotolerans |
18 | group_182 | PMI_RS00050 | 20133 | 21269 | 1 | dnaJ | molecular chaperone DnaJ | Proteus mirabilis HI4320 |
19 | group_182 | PMI_RS03925 | 885114 | 886058 | 1 | cbpA | curved DNA-binding protein | Proteus mirabilis HI4320 |
20 | group_523 | PMI_RS09165 | 1999446 | 1999967 | -1 | hscB | co-chaperone HscB | Proteus mirabilis HI4320 |
21 | group_1097 | PMI_RS11525 | 2541277 | 2542077 | -1 | djlA | co-chaperone DjlA | Proteus mirabilis HI4320 |
22 | group_182 | PMI_RS18735 | 34787 | 35311 | -1 | J domain-containing protein | Proteus mirabilis HI4320 |