PF00144


Help to interpret the results

Three outputs have been generated:
General: this result contains the description and frequency of the selected Pfam domains PF00144, of which KO pathways and KO modules it is part. Additionally, its occurence in the database is reported.
Proteins list: list of occurences of the Pfam domains within the database. 24 occurences are identified. The table reports the orthogroup, the organism in which each occurrence has been found, and the locus tag enriched by start and stop position, strand, gene name and product.
Clicking on the Ortohgroup name or locus you will be redirected to further info.
Profiles: Phylogenetic tree annotated with
- the presence of the Pfam domain(s) of interest within all the genomes of the database (first column)
- the size of the orthogroup(s) in which the reported Pfam domains has been clustered.
In red the Pfam domains with positive hit(s) in the corresponding genome.
In green the discrepencies between orthogroup clustering and Pfam domains prediction. Green homologs (same orthogroup) are not positive hit(s) for the considered Pfam domains.

Variations within orthogroups may be due to the clustering of multi domain proteins or because of erroneous homolog clustering or Pfam domains prediction.

Description

External link PF00144
Description Beta-lactamase

Occurence in the database

PF00144 is associated with 24 different proteins (see tab "Protein list" and "Profile")
The 24 proteins are classified into 4 different orthogroup(s)
# Orthogroup Locus Start Stop S. Gene Product Organism
0 group_3213 FBDBKF_02785 253702 254751 1 Serine hydrolase Morganella morganii S1
1 group_1434 FBDBKF_08870 155579 156802 -1 ampH D-alanyl-D-alanine-carboxypeptidase/endopeptidase AmpH Morganella morganii S1
2 group_2892 FBDBKF_11955 38641 39669 1 ampC CubicO group peptidase, beta-lactamase class C family Morganella morganii S1
3 group_3098 FBDBKF_19305 7814 8953 1 blaDHA-1 extended-spectrum class C beta-lactamase DHA-1 Morganella morganii S1
4 group_3213 EHELCC_03255 641522 642571 1 Serine hydrolase Morganella morganii S2
5 group_3098 EHELCC_07590 254905 256044 1 blaDHA-1 extended-spectrum class C beta-lactamase DHA-1 Morganella morganii S2
6 group_1434 EHELCC_12655 6923 8146 1 ampH D-alanyl-D-alanine-carboxypeptidase/endopeptidase AmpH Morganella morganii S2
7 group_2892 EHELCC_14350 95036 96064 -1 ampC CubicO group peptidase, beta-lactamase class C family Morganella morganii S2
8 group_3213 NLDBIP_00205 37565 38614 -1 Serine hydrolase Morganella morganii S4
9 group_3098 NLDBIP_07915 254778 255917 1 blaDHA-1 extended-spectrum class C beta-lactamase DHA-1 Morganella morganii S4
10 group_1434 NLDBIP_12995 6923 8146 1 ampH D-alanyl-D-alanine-carboxypeptidase/endopeptidase AmpH Morganella morganii S4
11 group_2892 NLDBIP_15445 98973 100001 -1 ampC CubicO group peptidase, beta-lactamase class C family Morganella morganii S4
12 group_3213 LHKJJB_01830 354071 355120 1 Serine hydrolase Morganella morganii S3
13 group_3098 LHKJJB_07450 218524 219663 1 blaDHA-1 extended-spectrum class C beta-lactamase DHA-1 Morganella morganii S3
14 group_1434 LHKJJB_13560 154297 155520 -1 ampH D-alanyl-D-alanine-carboxypeptidase/endopeptidase AmpH Morganella morganii S3
15 group_2892 LHKJJB_15165 38641 39669 1 ampC CubicO group peptidase, beta-lactamase class C family Morganella morganii S3
16 group_3213 HKOGLL_01870 359582 360631 1 Serine hydrolase Morganella morganii S5
17 group_3098 HKOGLL_03480 13724 14863 -1 blaDHA-1 extended-spectrum class C beta-lactamase DHA-1 Morganella morganii S5
18 group_1434 HKOGLL_11470 6923 8146 1 ampH D-alanyl-D-alanine-carboxypeptidase/endopeptidase AmpH Morganella morganii S5
19 group_2892 HKOGLL_14285 25304 26332 1 ampC CubicO group peptidase, beta-lactamase class C family Morganella morganii S5
20 group_1434 F4V73_RS10075 123022 124245 -1 ampH D-alanyl-D-alanine- carboxypeptidase/endopeptidase AmpH Morganella psychrotolerans
21 group_3098 F4V73_RS12065 566525 567664 1 ampC class C beta-lactamase Morganella psychrotolerans
22 group_2892 F4V73_RS14700 176816 177844 -1 serine hydrolase domain-containing protein Morganella psychrotolerans
23 group_1434 PMI_RS17280 3795147 3796364 -1 ampH D-alanyl-D-alanine- carboxypeptidase/endopeptidase AmpH Proteus mirabilis HI4320