K11903


Help to interpret the results

Three outputs have been generated:
General: this result contains the description and frequency of the selected Kegg Orthologs K11903, of which KO pathways and KO modules it is part. Additionally, its occurence in the database is reported.
Proteins list: list of occurences of the Kegg Orthologs within the database. 14 occurences are identified. The table reports the orthogroup, the organism in which each occurrence has been found, and the locus tag enriched by start and stop position, strand, gene name and product.
Clicking on the Ortohgroup name or locus you will be redirected to further info.
Profiles: Phylogenetic tree annotated with
- the presence of the Kegg Ortholog(s) of interest within all the genomes of the database (first column)
- the size of the orthogroup(s) in which the reported Kegg Orthologs has been clustered.
In red the Kegg Orthologs with positive hit(s) in the corresponding genome.
In green the discrepencies between orthogroup clustering and Kegg Orthologs prediction. Green homologs (same orthogroup) are not positive hit(s) for the considered Kegg Orthologs.

Variations within orthogroups may be due to the clustering of multi domain proteins or because of erroneous homolog clustering or Kegg Orthologs prediction.

Description

External link K11903
KO K11903
Description type VI secretion system secreted protein Hcp

KO part of 2 pathways

Biofilm formation - Pseudomonas aeruginosa
Bacterial secretion system

KO part of 0 modules

Occurence in the database

K11903 is associated with 14 different proteins (see tab "Protein list" and "Profile")
The 14 proteins are classified into 3 different orthogroup(s)
# Orthogroup Locus Start Stop S. Gene Product Organism
0 group_168 PMI_RS05420 1185979 1186497 1 Hcp family type VI secretion system effector Proteus mirabilis HI4320
1 group_168 PMI_RS00995 245183 245701 1 Hcp family type VI secretion system effector Proteus mirabilis HI4320
2 group_168 PMI_RS03690 831710 832228 1 Hcp family type VI secretion system effector Proteus mirabilis HI4320
3 group_168 PMI_RS14785 3278930 3279448 1 Hcp family type VI secretion system effector Proteus mirabilis HI4320
4 group_168 FBDBKF_16725 26941 27459 -1 hcp Type VI protein secretion system component Hcp (secreted cytotoxin) Morganella morganii S1
5 group_168 EHELCC_10735 186312 186830 1 hcp Type VI protein secretion system component Hcp (secreted cytotoxin) Morganella morganii S2
6 group_168 NLDBIP_11080 164583 165101 1 hcp Type VI protein secretion system component Hcp (secreted cytotoxin) Morganella morganii S4
7 group_168 LHKJJB_10275 26427 26945 -1 hcp Type VI protein secretion system component Hcp (secreted cytotoxin) Morganella morganii S3
8 group_168 HKOGLL_16440 26436 26954 -1 hcp Type VI protein secretion system component Hcp (secreted cytotoxin) Morganella morganii S5
9 group_3720 F4V73_RS00085 22000 22518 -1 Hcp family type VI secretion system effector Morganella psychrotolerans
10 group_168 F4V73_RS05140 1097166 1097684 -1 Hcp family type VI secretion system effector Morganella psychrotolerans
11 group_3720 F4V73_RS07030 1460007 1460525 -1 type VI secretion system tube protein Hcp Morganella psychrotolerans
12 group_3720 F4V73_RS09355 1968826 1969311 -1 Hcp family type VI secretion system effector Morganella psychrotolerans
13 group_29 F4V73_RS16845 197547 198038 -1 Hcp family type VI secretion system effector Morganella psychrotolerans