K08476


Help to interpret the results

Three outputs have been generated:
General: this result contains the description and frequency of the selected Kegg Orthologs K08476, of which KO pathways and KO modules it is part. Additionally, its occurence in the database is reported.
Proteins list: list of occurences of the Kegg Orthologs within the database. 7 occurences are identified. The table reports the orthogroup, the organism in which each occurrence has been found, and the locus tag enriched by start and stop position, strand, gene name and product.
Clicking on the Ortohgroup name or locus you will be redirected to further info.
Profiles: Phylogenetic tree annotated with
- the presence of the Kegg Ortholog(s) of interest within all the genomes of the database (first column)
- the size of the orthogroup(s) in which the reported Kegg Orthologs has been clustered.
In red the Kegg Orthologs with positive hit(s) in the corresponding genome.
In green the discrepencies between orthogroup clustering and Kegg Orthologs prediction. Green homologs (same orthogroup) are not positive hit(s) for the considered Kegg Orthologs.

Variations within orthogroups may be due to the clustering of multi domain proteins or because of erroneous homolog clustering or Kegg Orthologs prediction.

Description

External link K08476
KO K08476
Description two-component system, NtrC family, phosphoglycerate transport system response regulator PgtA

KO part of 1 pathways

Two-component system

KO part of 0 modules

Occurence in the database

K08476 is associated with 7 different proteins (see tab "Protein list" and "Profile")
The 7 proteins are classified into 1 different orthogroup(s)
# Orthogroup Locus Start Stop S. Gene Product Organism
0 group_1437 PMI_RS11900 2627627 2628904 -1 sigma-54 dependent transcriptional regulator Proteus mirabilis HI4320
1 group_1437 FBDBKF_09065 28763 30010 -1 atoC DNA-binding transcriptional response regulator, NtrC family, contains REC, AAA-type ATPase, and a Fis-type DNA-binding domains Morganella morganii S1
2 group_1437 EHELCC_10345 116094 117341 1 atoC DNA-binding transcriptional response regulator, NtrC family, contains REC, AAA-type ATPase, and a Fis-type DNA-binding domains Morganella morganii S2
3 group_1437 NLDBIP_10690 94365 95612 1 atoC DNA-binding transcriptional response regulator, NtrC family, contains REC, AAA-type ATPase, and a Fis-type DNA-binding domains Morganella morganii S4
4 group_1437 LHKJJB_10665 95916 97163 -1 atoC DNA-binding transcriptional response regulator, NtrC family, contains REC, AAA-type ATPase, and a Fis-type DNA-binding domains Morganella morganii S3
5 group_1437 HKOGLL_13725 29217 30464 -1 atoC DNA-binding transcriptional response regulator, NtrC family, contains REC, AAA-type ATPase, and a Fis-type DNA-binding domains Morganella morganii S5
6 group_1437 F4V73_RS10880 314778 316028 1 sigma-54 dependent transcriptional regulator Morganella psychrotolerans