K06080


Help to interpret the results

Three outputs have been generated:
General: this result contains the description and frequency of the selected Kegg Orthologs K06080, of which KO pathways and KO modules it is part. Additionally, its occurence in the database is reported.
Proteins list: list of occurences of the Kegg Orthologs within the database. 7 occurences are identified. The table reports the orthogroup, the organism in which each occurrence has been found, and the locus tag enriched by start and stop position, strand, gene name and product.
Clicking on the Ortohgroup name or locus you will be redirected to further info.
Profiles: Phylogenetic tree annotated with
- the presence of the Kegg Ortholog(s) of interest within all the genomes of the database (first column)
- the size of the orthogroup(s) in which the reported Kegg Orthologs has been clustered.
In red the Kegg Orthologs with positive hit(s) in the corresponding genome.
In green the discrepencies between orthogroup clustering and Kegg Orthologs prediction. Green homologs (same orthogroup) are not positive hit(s) for the considered Kegg Orthologs.

Variations within orthogroups may be due to the clustering of multi domain proteins or because of erroneous homolog clustering or Kegg Orthologs prediction.

Description

External link K06080
KO K06080
Description RcsF protein

KO part of 1 pathways

Two-component system

KO part of 0 modules

Occurence in the database

K06080 is associated with 7 different proteins (see tab "Protein list" and "Profile")
The 7 proteins are classified into 1 different orthogroup(s)
# Orthogroup Locus Start Stop S. Gene Product Organism
0 group_1043 PMI_RS11170 2457939 2458343 1 rcsF Rcs stress response system protein RcsF Proteus mirabilis HI4320
1 group_1043 FBDBKF_05900 3763 4173 1 rcsF Rcs stress response system protein RcsF Morganella morganii S1
2 group_1043 EHELCC_08945 4335 4745 1 rcsF Rcs stress response system protein RcsF Morganella morganii S2
3 group_1043 NLDBIP_09325 4335 4745 1 rcsF Rcs stress response system protein RcsF Morganella morganii S4
4 group_1043 LHKJJB_08430 212493 212903 -1 rcsF Rcs stress response system protein RcsF Morganella morganii S3
5 group_1043 HKOGLL_07980 212493 212903 -1 rcsF Rcs stress response system protein RcsF Morganella morganii S5
6 group_1043 F4V73_RS15995 209293 209703 -1 rcsF Rcs stress response system protein RcsF Morganella psychrotolerans