K05541


Help to interpret the results

Three outputs have been generated:
General: this result contains the description and frequency of the selected Kegg Orthologs K05541, of which KO pathways and KO modules it is part. Additionally, its occurence in the database is reported.
Proteins list: list of occurences of the Kegg Orthologs within the database. 7 occurences are identified. The table reports the orthogroup, the organism in which each occurrence has been found, and the locus tag enriched by start and stop position, strand, gene name and product.
Clicking on the Ortohgroup name or locus you will be redirected to further info.
Profiles: Phylogenetic tree annotated with
- the presence of the Kegg Ortholog(s) of interest within all the genomes of the database (first column)
- the size of the orthogroup(s) in which the reported Kegg Orthologs has been clustered.
In red the Kegg Orthologs with positive hit(s) in the corresponding genome.
In green the discrepencies between orthogroup clustering and Kegg Orthologs prediction. Green homologs (same orthogroup) are not positive hit(s) for the considered Kegg Orthologs.

Variations within orthogroups may be due to the clustering of multi domain proteins or because of erroneous homolog clustering or Kegg Orthologs prediction.

Description

External link K05541
KO K05541
Description tRNA-dihydrouridine synthase C [EC:1.-.-.-]

KO part of 0 pathways

KO part of 0 modules

Occurence in the database

K05541 is associated with 7 different proteins (see tab "Protein list" and "Profile")
The 7 proteins are classified into 1 different orthogroup(s)
# Orthogroup Locus Start Stop S. Gene Product Organism
0 group_87 PMI_RS03060 674541 675473 1 dusC tRNA dihydrouridine(16) synthase DusC Proteus mirabilis HI4320
1 group_87 FBDBKF_09520 1814 2746 -1 dusC tRNA dihydrouridine(16) synthase DusC Morganella morganii S1
2 group_87 EHELCC_04320 193779 194711 -1 dusC tRNA dihydrouridine(16) synthase DusC Morganella morganii S2
3 group_87 NLDBIP_04320 193575 194507 -1 dusC tRNA dihydrouridine(16) synthase DusC Morganella morganii S4
4 group_87 LHKJJB_14310 140871 141803 1 dusC tRNA dihydrouridine(16) synthase DusC Morganella morganii S3
5 group_87 HKOGLL_12225 2595 3527 -1 dusC tRNA dihydrouridine(16) synthase DusC Morganella morganii S5
6 group_87 F4V73_RS00835 173370 174362 1 dusC tRNA dihydrouridine(16) synthase DusC Morganella psychrotolerans