K05540


Help to interpret the results

Three outputs have been generated:
General: this result contains the description and frequency of the selected Kegg Orthologs K05540, of which KO pathways and KO modules it is part. Additionally, its occurence in the database is reported.
Proteins list: list of occurences of the Kegg Orthologs within the database. 7 occurences are identified. The table reports the orthogroup, the organism in which each occurrence has been found, and the locus tag enriched by start and stop position, strand, gene name and product.
Clicking on the Ortohgroup name or locus you will be redirected to further info.
Profiles: Phylogenetic tree annotated with
- the presence of the Kegg Ortholog(s) of interest within all the genomes of the database (first column)
- the size of the orthogroup(s) in which the reported Kegg Orthologs has been clustered.
In red the Kegg Orthologs with positive hit(s) in the corresponding genome.
In green the discrepencies between orthogroup clustering and Kegg Orthologs prediction. Green homologs (same orthogroup) are not positive hit(s) for the considered Kegg Orthologs.

Variations within orthogroups may be due to the clustering of multi domain proteins or because of erroneous homolog clustering or Kegg Orthologs prediction.

Description

External link K05540
KO K05540
Description tRNA-dihydrouridine synthase B [EC:1.-.-.-]

KO part of 0 pathways

KO part of 0 modules

Occurence in the database

K05540 is associated with 7 different proteins (see tab "Protein list" and "Profile")
The 7 proteins are classified into 1 different orthogroup(s)
# Orthogroup Locus Start Stop S. Gene Product Organism
0 group_756 PMI_RS18025 3959954 3960925 -1 dusB tRNA dihydrouridine synthase DusB Proteus mirabilis HI4320
1 group_756 FBDBKF_03375 76912 77883 1 dusB tRNA dihydrouridine synthase DusB Morganella morganii S1
2 group_756 EHELCC_07160 169220 170191 -1 dusB tRNA dihydrouridine synthase DusB Morganella morganii S2
3 group_756 NLDBIP_07485 169093 170064 -1 dusB tRNA dihydrouridine synthase DusB Morganella morganii S4
4 group_756 LHKJJB_07020 132839 133810 -1 dusB tRNA dihydrouridine synthase DusB Morganella morganii S3
5 group_756 HKOGLL_03910 99577 100548 1 dusB tRNA dihydrouridine synthase DusB Morganella morganii S5
6 group_756 F4V73_RS11555 460873 461844 -1 dusB tRNA dihydrouridine synthase DusB Morganella psychrotolerans