K05539


Help to interpret the results

Three outputs have been generated:
General: this result contains the description and frequency of the selected Kegg Orthologs K05539, of which KO pathways and KO modules it is part. Additionally, its occurence in the database is reported.
Proteins list: list of occurences of the Kegg Orthologs within the database. 7 occurences are identified. The table reports the orthogroup, the organism in which each occurrence has been found, and the locus tag enriched by start and stop position, strand, gene name and product.
Clicking on the Ortohgroup name or locus you will be redirected to further info.
Profiles: Phylogenetic tree annotated with
- the presence of the Kegg Ortholog(s) of interest within all the genomes of the database (first column)
- the size of the orthogroup(s) in which the reported Kegg Orthologs has been clustered.
In red the Kegg Orthologs with positive hit(s) in the corresponding genome.
In green the discrepencies between orthogroup clustering and Kegg Orthologs prediction. Green homologs (same orthogroup) are not positive hit(s) for the considered Kegg Orthologs.

Variations within orthogroups may be due to the clustering of multi domain proteins or because of erroneous homolog clustering or Kegg Orthologs prediction.

Description

External link K05539
KO K05539
Description tRNA-dihydrouridine synthase A [EC:1.-.-.-]

KO part of 0 pathways

KO part of 0 modules

Occurence in the database

K05539 is associated with 7 different proteins (see tab "Protein list" and "Profile")
The 7 proteins are classified into 1 different orthogroup(s)
# Orthogroup Locus Start Stop S. Gene Product Organism
0 group_2230 PMI_RS13500 2991572 2992606 1 dusA tRNA dihydrouridine(20/20a) synthase DusA Proteus mirabilis HI4320
1 group_2230 FBDBKF_17065 45322 46368 -1 dusA tRNA dihydrouridine(20/20a) synthase DusA Morganella morganii S1
2 group_2230 EHELCC_16525 22142 23188 1 dusA tRNA dihydrouridine(20/20a) synthase DusA Morganella morganii S2
3 group_2230 NLDBIP_16735 22142 23188 1 dusA tRNA dihydrouridine(20/20a) synthase DusA Morganella morganii S4
4 group_2230 LHKJJB_16735 45322 46368 -1 dusA tRNA dihydrouridine(20/20a) synthase DusA Morganella morganii S3
5 group_2230 HKOGLL_18880 22142 23188 1 dusA tRNA dihydrouridine(20/20a) synthase DusA Morganella morganii S5
6 group_2230 F4V73_RS18545 46293 47339 -1 dusA tRNA dihydrouridine(20/20a) synthase DusA Morganella psychrotolerans