K03092


Help to interpret the results

Three outputs have been generated:
General: this tab contains the description, occurence in the database and other information related to the selected Kegg Ortholog K03092
Protein list: lists the 7 occurences of the Kegg Ortholog within the database. The table reports information on each occurence.
Profile: phylogenetic tree annotated with
- the presence of the Kegg Ortholog of interest within all the genomes of the database (first column)
- the size of the orthogroup(s) in which the reported Kegg Ortholog has been clustered.
Orthogroups are shown in red if they are annotated with that particular Kegg Ortholog in a given genome , in green otherwise, i.e. if there is a discrepency between orthogroup clustering and Kegg Ortholog prediction.
Green homologs (same orthogroup) are not positive hit(s) for the considered Kegg Ortholog.
Variations within orthogroups may be due to the clustering of multi domain proteins or because of erroneous homolog clustering or Kegg Ortholog prediction.

Description

External link K03092
KO K03092
Description RNA polymerase sigma-54 factor

Occurence in the database

K03092 is associated with 7 different proteins
The 7 proteins are classified into 1 different orthogroup(s)
Orthogroup Locus Start Stop S. Gene Product Organism
0 group_807 FBDBKF_03250 50651 52087 1 rpoN RNA polymerase factor sigma-54 Morganella morganii S1
1 group_807 EHELCC_07285 195016 196452 -1 rpoN RNA polymerase factor sigma-54 Morganella morganii S2
2 group_807 NLDBIP_07610 194889 196325 -1 rpoN RNA polymerase factor sigma-54 Morganella morganii S4
3 group_807 LHKJJB_07145 158635 160071 -1 rpoN RNA polymerase factor sigma-54 Morganella morganii S3
4 group_807 HKOGLL_03785 73316 74752 1 rpoN RNA polymerase factor sigma-54 Morganella morganii S5
5 group_807 F4V73_RS11670 484558 485994 -1 rpoN RNA polymerase factor sigma-54 Morganella psychrotolerans
6 group_807 PMI_RS18150 3985286 3986761 -1 rpoN RNA polymerase factor sigma-54 Proteus mirabilis HI4320