K03086


Help to interpret the results

Three outputs have been generated:
General: this tab contains the description, occurence in the database and other information related to the selected Kegg Ortholog K03086
Protein list: lists the 7 occurences of the Kegg Ortholog within the database. The table reports information on each occurence.
Profile: phylogenetic tree annotated with
- the presence of the Kegg Ortholog of interest within all the genomes of the database (first column)
- the size of the orthogroup(s) in which the reported Kegg Ortholog has been clustered.
Orthogroups are shown in red if they are annotated with that particular Kegg Ortholog in a given genome , in green otherwise, i.e. if there is a discrepency between orthogroup clustering and Kegg Ortholog prediction.
Green homologs (same orthogroup) are not positive hit(s) for the considered Kegg Ortholog.
Variations within orthogroups may be due to the clustering of multi domain proteins or because of erroneous homolog clustering or Kegg Ortholog prediction.

Description

External link K03086
KO K03086
Description RNA polymerase primary sigma factor

KO part of 1 pathways

Flagellar assembly

KO part of 0 modules

Occurence in the database

K03086 is associated with 7 different proteins
The 7 proteins are classified into 1 different orthogroup(s)
Orthogroup Locus Start Stop S. Gene Product Organism
0 group_2317 FBDBKF_17530 40418 42268 1 rpoD RNA polymerase sigma factor RpoD Morganella morganii S1
1 group_2317 EHELCC_17425 40418 42268 1 rpoD RNA polymerase sigma factor RpoD Morganella morganii S2
2 group_2317 NLDBIP_17770 528 2378 -1 rpoD RNA polymerase sigma factor RpoD Morganella morganii S4
3 group_2317 LHKJJB_17690 526 2376 -1 rpoD RNA polymerase sigma factor RpoD Morganella morganii S3
4 group_2317 HKOGLL_17700 526 2376 -1 rpoD RNA polymerase sigma factor RpoD Morganella morganii S5
5 group_2317 F4V73_RS16710 164268 166163 1 rpoD RNA polymerase sigma factor RpoD Morganella psychrotolerans
6 group_2317 PMI_RS11730 2591863 2593719 1 rpoD RNA polymerase sigma factor RpoD Proteus mirabilis HI4320