K01935


Help to interpret the results

Three outputs have been generated:
General: this result contains the description and frequency of the selected Kegg Orthologs K01935, of which KO pathways and KO modules it is part. Additionally, its occurence in the database is reported.
Proteins list: list of occurences of the Kegg Orthologs within the database. 14 occurences are identified. The table reports the orthogroup, the organism in which each occurrence has been found, and the locus tag enriched by start and stop position, strand, gene name and product.
Clicking on the Ortohgroup name or locus you will be redirected to further info.
Profiles: Phylogenetic tree annotated with
- the presence of the Kegg Ortholog(s) of interest within all the genomes of the database (first column)
- the size of the orthogroup(s) in which the reported Kegg Orthologs has been clustered.
In red the Kegg Orthologs with positive hit(s) in the corresponding genome.
In green the discrepencies between orthogroup clustering and Kegg Orthologs prediction. Green homologs (same orthogroup) are not positive hit(s) for the considered Kegg Orthologs.

Variations within orthogroups may be due to the clustering of multi domain proteins or because of erroneous homolog clustering or Kegg Orthologs prediction.

Description

External link K01935
KO K01935
Description dethiobiotin synthetase [EC:6.3.3.3]

KO part of 3 pathways

Biotin metabolism
Metabolic pathways
Biosynthesis of cofactors

KO part of 4 modules

M00123 Cofactor and vitamin metabolism Biotin biosynthesis, pimeloyl-ACP/CoA => biotin
M00573 Cofactor and vitamin metabolism Biotin biosynthesis, BioI pathway, long-chain-acyl-ACP => pimeloyl-ACP => biotin
M00577 Cofactor and vitamin metabolism Biotin biosynthesis, BioW pathway, pimelate => pimeloyl-CoA => biotin
M00950 Cofactor and vitamin metabolism Biotin biosynthesis, BioU pathway, pimeloyl-ACP/CoA => biotin

Occurence in the database

K01935 is associated with 14 different proteins (see tab "Protein list" and "Profile")
The 14 proteins are classified into 2 different orthogroup(s)
# Orthogroup Locus Start Stop S. Gene Product Organism
0 group_1488 PMI_RS02985 658009 658695 1 bioD dethiobiotin synthase Proteus mirabilis HI4320
1 group_696 PMI_RS06230 1363931 1364602 -1 bioD dethiobiotin synthase Proteus mirabilis HI4320
2 group_696 FBDBKF_02965 286413 287102 -1 bioD dethiobiotin synthase Morganella morganii S1
3 group_696 EHELCC_03435 674233 674922 -1 bioD dethiobiotin synthase Morganella morganii S2
4 group_696 NLDBIP_00025 5214 5903 1 bioD dethiobiotin synthase Morganella morganii S4
5 group_696 LHKJJB_02010 386782 387471 -1 bioD dethiobiotin synthase Morganella morganii S3
6 group_696 HKOGLL_02050 392293 392982 -1 bioD dethiobiotin synthase Morganella morganii S5
7 group_1488 FBDBKF_09605 19924 20607 -1 bioD dethiobiotin synthase Morganella morganii S1
8 group_1488 EHELCC_04405 211889 212572 -1 bioD dethiobiotin synthase Morganella morganii S2
9 group_1488 NLDBIP_04405 211685 212368 -1 bioD dethiobiotin synthase Morganella morganii S4
10 group_1488 LHKJJB_14225 123010 123693 1 bioD dethiobiotin synthase Morganella morganii S3
11 group_1488 HKOGLL_12310 20705 21388 -1 bioD dethiobiotin synthase Morganella morganii S5
12 group_1488 F4V73_RS00735 152995 153675 1 bioD dethiobiotin synthase Morganella psychrotolerans
13 group_696 F4V73_RS05405 1146536 1147225 -1 bioD dethiobiotin synthase Morganella psychrotolerans