COG4942


Help to interpret the results

Three outputs have been generated:
General: this result contains the description and frequency of the selected COG entries COG4942, of which KO pathways and KO modules it is part. Additionally, its occurence in the database is reported.
Proteins list: list of occurences of the COG entries within the database. 15 occurences are identified. The table reports the orthogroup, the organism in which each occurrence has been found, and the locus tag enriched by start and stop position, strand, gene name and product.
Clicking on the Ortohgroup name or locus you will be redirected to further info.
Profiles: Phylogenetic tree annotated with
- the presence of the COG entry(ies) of interest within all the genomes of the database (first column)
- the size of the orthogroup(s) in which the reported COG entries has been clustered.
In red the COG entries with positive hit(s) in the corresponding genome.
In green the discrepencies between orthogroup clustering and COG entries prediction. Green homologs (same orthogroup) are not positive hit(s) for the considered COG entries.

Variations within orthogroups may be due to the clustering of multi domain proteins or because of erroneous homolog clustering or COG entries prediction.

Description

Description Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB
Function(s) descr. Cell cycle control, cell division, chromosome partitioning (D)

Occurence in the database

COG4942 is associated with 15 different proteins (see tab "Protein list" and "Profile")
The 15 proteins are classified into 2 different orthogroup(s)
# Orthogroup Locus Start Stop S. Gene Product Organism
0 group_2170 FBDBKF_16330 54022 55305 -1 envC Murein hydrolase activator EnvC Morganella morganii S1
1 group_421 FBDBKF_18970 12138 13259 -1 nlpD murein hydrolase activator NlpD Morganella morganii S1
2 group_2170 EHELCC_16365 54022 55305 -1 envC Murein hydrolase activator EnvC Morganella morganii S2
3 group_421 EHELCC_18715 12138 13259 -1 nlpD murein hydrolase activator NlpD Morganella morganii S2
4 group_2170 NLDBIP_16975 6865 8148 1 envC Murein hydrolase activator EnvC Morganella morganii S4
5 group_421 NLDBIP_18590 12254 13375 1 nlpD murein hydrolase activator NlpD Morganella morganii S4
6 group_2170 LHKJJB_16895 9967 11250 1 envC Murein hydrolase activator EnvC Morganella morganii S3
7 group_421 LHKJJB_18585 12138 13259 -1 nlpD murein hydrolase activator NlpD Morganella morganii S3
8 group_2170 HKOGLL_16945 54022 55305 -1 envC Murein hydrolase activator EnvC Morganella morganii S5
9 group_421 HKOGLL_18320 12138 13259 -1 nlpD murein hydrolase activator NlpD Morganella morganii S5
10 group_421 F4V73_RS05050 1075935 1076411 1 peptidoglycan DD-metalloendopeptidase family protein Morganella psychrotolerans
11 group_421 F4V73_RS13880 413571 414680 -1 nlpD murein hydrolase activator NlpD Morganella psychrotolerans
12 group_2170 F4V73_RS17250 81217 82428 1 envC murein hydrolase activator EnvC Morganella psychrotolerans
13 group_421 PMI_RS11020 2427069 2428193 -1 nlpD murein hydrolase activator NlpD Proteus mirabilis HI4320
14 group_2170 PMI_RS15725 3493643 3494935 -1 envC murein hydrolase activator EnvC Proteus mirabilis HI4320