COG4577


Help to interpret the results

Three outputs have been generated:
General: this result contains the description and frequency of the selected COG entries COG4577, of which KO pathways and KO modules it is part. Additionally, its occurence in the database is reported.
Proteins list: list of occurences of the COG entries within the database. 22 occurences are identified. The table reports the orthogroup, the organism in which each occurrence has been found, and the locus tag enriched by start and stop position, strand, gene name and product.
Clicking on the Ortohgroup name or locus you will be redirected to further info.
Profiles: Phylogenetic tree annotated with
- the presence of the COG entry(ies) of interest within all the genomes of the database (first column)
- the size of the orthogroup(s) in which the reported COG entries has been clustered.
In red the COG entries with positive hit(s) in the corresponding genome.
In green the discrepencies between orthogroup clustering and COG entries prediction. Green homologs (same orthogroup) are not positive hit(s) for the considered COG entries.

Variations within orthogroups may be due to the clustering of multi domain proteins or because of erroneous homolog clustering or COG entries prediction.

Description

Description Carboxysome shell and ethanolamine utilization microcompartment protein CcmL/EutN
Function(s) descr. Secondary metabolites biosynthesis, transport and catabolism (Q)
Energy production and conversion (C)

Occurence in the database

COG4577 is associated with 22 different proteins (see tab "Protein list" and "Profile")
The 22 proteins are classified into 3 different orthogroup(s)
# Orthogroup Locus Start Stop S. Gene Product Organism
0 group_153 FBDBKF_07560 23777 24070 1 eutM ethanolamine utilization microcompartment protein EutM Morganella morganii S1
1 group_2745 FBDBKF_07610 33854 34411 1 ccmK Carboxysome shell and ethanolamine utilization microcompartment protein CcmL/EutN Morganella morganii S1
2 group_2747 FBDBKF_07620 35759 36313 1 ccmK Carboxysome shell and ethanolamine utilization microcompartment protein CcmL/EutN Morganella morganii S1
3 group_2745 EHELCC_13440 8048 8605 1 ccmK Carboxysome shell and ethanolamine utilization microcompartment protein CcmL/EutN Morganella morganii S2
4 group_2747 EHELCC_13450 9953 10507 1 ccmK Carboxysome shell and ethanolamine utilization microcompartment protein CcmL/EutN Morganella morganii S2
5 group_153 EHELCC_17230 51427 51720 1 eutM ethanolamine utilization microcompartment protein EutM Morganella morganii S2
6 group_153 NLDBIP_13835 18846 19139 1 eutM ethanolamine utilization microcompartment protein EutM Morganella morganii S4
7 group_2745 NLDBIP_13885 28923 29480 1 ccmK Carboxysome shell and ethanolamine utilization microcompartment protein CcmL/EutN Morganella morganii S4
8 group_2747 NLDBIP_13895 30828 31382 1 ccmK Carboxysome shell and ethanolamine utilization microcompartment protein CcmL/EutN Morganella morganii S4
9 group_2747 LHKJJB_08955 128367 128921 -1 ccmK Carboxysome shell and ethanolamine utilization microcompartment protein CcmL/EutN Morganella morganii S3
10 group_2745 LHKJJB_08965 130269 130826 -1 ccmK Carboxysome shell and ethanolamine utilization microcompartment protein CcmL/EutN Morganella morganii S3
11 group_153 LHKJJB_09015 140610 140903 -1 eutM ethanolamine utilization microcompartment protein EutM Morganella morganii S3
12 group_2747 HKOGLL_08505 128367 128921 -1 ccmK Carboxysome shell and ethanolamine utilization microcompartment protein CcmL/EutN Morganella morganii S5
13 group_2745 HKOGLL_08515 130269 130826 -1 ccmK Carboxysome shell and ethanolamine utilization microcompartment protein CcmL/EutN Morganella morganii S5
14 group_153 HKOGLL_08565 140610 140903 -1 eutM ethanolamine utilization microcompartment protein EutM Morganella morganii S5
15 group_2747 F4V73_RS13500 334449 335003 -1 BMC domain-containing protein Morganella psychrotolerans
16 group_2745 F4V73_RS13510 336351 336917 -1 BMC domain-containing protein Morganella psychrotolerans
17 group_153 F4V73_RS13560 346725 347018 -1 eutM ethanolamine utilization microcompartment protein EutM Morganella psychrotolerans
18 group_153 PMI_RS13375 2963719 2964225 -1 BMC domain-containing protein Proteus mirabilis HI4320
19 group_153 PMI_RS13405 2971942 2972220 -1 BMC domain-containing protein Proteus mirabilis HI4320
20 group_153 PMI_RS13410 2972235 2972519 -1 BMC domain-containing protein Proteus mirabilis HI4320
21 group_153 PMI_RS13415 2972540 2972818 -1 BMC domain-containing protein Proteus mirabilis HI4320