COG4577
Help to interpret the results
Three outputs have been generated:
General: this result contains the description and frequency of the selected COG entries COG4577, of which KO pathways and KO modules it is part. Additionally, its occurence in the database is reported.
Proteins list: list of occurences of the COG entries
within the database. 22 occurences are identified.
The table reports the orthogroup, the organism in which each occurrence has been found, and the locus tag enriched by start and stop position, strand, gene name and product.
Clicking on the Ortohgroup name or locus you will be redirected to further info.
Profiles: Phylogenetic tree annotated with
- the presence of the COG entry(ies) of interest within all the genomes of the database (first column)
- the size of the orthogroup(s) in which the reported COG entries has been clustered.
In red the COG entries with positive hit(s) in the corresponding genome.
In green the discrepencies between orthogroup clustering and COG entries prediction.
Green homologs (same orthogroup) are not positive hit(s) for the considered COG entries.
Variations within orthogroups may be due to the clustering of multi domain proteins or because of erroneous homolog clustering or COG entries prediction.
Description
Description | Carboxysome shell and ethanolamine utilization microcompartment protein CcmL/EutN |
---|---|
Function(s) descr. | Secondary metabolites biosynthesis, transport and catabolism (Q) Energy production and conversion (C) |
Occurence in the database
COG4577 is associated with 22 different proteins (see tab "Protein list" and "Profile") |
The 22 proteins are classified into 3 different orthogroup(s) |
# | Orthogroup | Locus | Start | Stop | S. | Gene | Product | Organism |
---|---|---|---|---|---|---|---|---|
0 | group_153 | FBDBKF_07560 | 23777 | 24070 | 1 | eutM | ethanolamine utilization microcompartment protein EutM | Morganella morganii S1 |
1 | group_2745 | FBDBKF_07610 | 33854 | 34411 | 1 | ccmK | Carboxysome shell and ethanolamine utilization microcompartment protein CcmL/EutN | Morganella morganii S1 |
2 | group_2747 | FBDBKF_07620 | 35759 | 36313 | 1 | ccmK | Carboxysome shell and ethanolamine utilization microcompartment protein CcmL/EutN | Morganella morganii S1 |
3 | group_2745 | EHELCC_13440 | 8048 | 8605 | 1 | ccmK | Carboxysome shell and ethanolamine utilization microcompartment protein CcmL/EutN | Morganella morganii S2 |
4 | group_2747 | EHELCC_13450 | 9953 | 10507 | 1 | ccmK | Carboxysome shell and ethanolamine utilization microcompartment protein CcmL/EutN | Morganella morganii S2 |
5 | group_153 | EHELCC_17230 | 51427 | 51720 | 1 | eutM | ethanolamine utilization microcompartment protein EutM | Morganella morganii S2 |
6 | group_153 | NLDBIP_13835 | 18846 | 19139 | 1 | eutM | ethanolamine utilization microcompartment protein EutM | Morganella morganii S4 |
7 | group_2745 | NLDBIP_13885 | 28923 | 29480 | 1 | ccmK | Carboxysome shell and ethanolamine utilization microcompartment protein CcmL/EutN | Morganella morganii S4 |
8 | group_2747 | NLDBIP_13895 | 30828 | 31382 | 1 | ccmK | Carboxysome shell and ethanolamine utilization microcompartment protein CcmL/EutN | Morganella morganii S4 |
9 | group_2747 | LHKJJB_08955 | 128367 | 128921 | -1 | ccmK | Carboxysome shell and ethanolamine utilization microcompartment protein CcmL/EutN | Morganella morganii S3 |
10 | group_2745 | LHKJJB_08965 | 130269 | 130826 | -1 | ccmK | Carboxysome shell and ethanolamine utilization microcompartment protein CcmL/EutN | Morganella morganii S3 |
11 | group_153 | LHKJJB_09015 | 140610 | 140903 | -1 | eutM | ethanolamine utilization microcompartment protein EutM | Morganella morganii S3 |
12 | group_2747 | HKOGLL_08505 | 128367 | 128921 | -1 | ccmK | Carboxysome shell and ethanolamine utilization microcompartment protein CcmL/EutN | Morganella morganii S5 |
13 | group_2745 | HKOGLL_08515 | 130269 | 130826 | -1 | ccmK | Carboxysome shell and ethanolamine utilization microcompartment protein CcmL/EutN | Morganella morganii S5 |
14 | group_153 | HKOGLL_08565 | 140610 | 140903 | -1 | eutM | ethanolamine utilization microcompartment protein EutM | Morganella morganii S5 |
15 | group_2747 | F4V73_RS13500 | 334449 | 335003 | -1 | BMC domain-containing protein | Morganella psychrotolerans | |
16 | group_2745 | F4V73_RS13510 | 336351 | 336917 | -1 | BMC domain-containing protein | Morganella psychrotolerans | |
17 | group_153 | F4V73_RS13560 | 346725 | 347018 | -1 | eutM | ethanolamine utilization microcompartment protein EutM | Morganella psychrotolerans |
18 | group_153 | PMI_RS13375 | 2963719 | 2964225 | -1 | BMC domain-containing protein | Proteus mirabilis HI4320 | |
19 | group_153 | PMI_RS13405 | 2971942 | 2972220 | -1 | BMC domain-containing protein | Proteus mirabilis HI4320 | |
20 | group_153 | PMI_RS13410 | 2972235 | 2972519 | -1 | BMC domain-containing protein | Proteus mirabilis HI4320 | |
21 | group_153 | PMI_RS13415 | 2972540 | 2972818 | -1 | BMC domain-containing protein | Proteus mirabilis HI4320 |