COG4559


Help to interpret the results

Three outputs have been generated:
General: this result contains the description and frequency of the selected COG entries COG4559, of which KO pathways and KO modules it is part. Additionally, its occurence in the database is reported.
Proteins list: list of occurences of the COG entries within the database. 7 occurences are identified. The table reports the orthogroup, the organism in which each occurrence has been found, and the locus tag enriched by start and stop position, strand, gene name and product.
Clicking on the Ortohgroup name or locus you will be redirected to further info.
Profiles: Phylogenetic tree annotated with
- the presence of the COG entry(ies) of interest within all the genomes of the database (first column)
- the size of the orthogroup(s) in which the reported COG entries has been clustered.
In red the COG entries with positive hit(s) in the corresponding genome.
In green the discrepencies between orthogroup clustering and COG entries prediction. Green homologs (same orthogroup) are not positive hit(s) for the considered COG entries.

Variations within orthogroups may be due to the clustering of multi domain proteins or because of erroneous homolog clustering or COG entries prediction.

Description

Description ABC-type hemin transport system, ATPase component
Function(s) descr. Inorganic ion transport and metabolism (P)

Occurence in the database

COG4559 is associated with 7 different proteins (see tab "Protein list" and "Profile")
The 7 proteins are classified into 1 different orthogroup(s)
# Orthogroup Locus Start Stop S. Gene Product Organism
0 group_1794 FBDBKF_13315 41496 42296 1 fepC heme ABC transporter ATP-binding protein Morganella morganii S1
1 group_1794 EHELCC_08780 232895 233695 -1 fepC heme ABC transporter ATP-binding protein Morganella morganii S2
2 group_1794 NLDBIP_09105 232895 233695 -1 fepC heme ABC transporter ATP-binding protein Morganella morganii S4
3 group_1794 LHKJJB_05160 23464 24264 1 fepC heme ABC transporter ATP-binding protein Morganella morganii S3
4 group_1794 HKOGLL_05755 217486 218286 -1 fepC heme ABC transporter ATP-binding protein Morganella morganii S5
5 group_1794 F4V73_RS03440 733165 733956 -1 heme ABC transporter ATP-binding protein Morganella psychrotolerans
6 group_1794 PMI_RS06920 1514608 1515402 1 heme ABC transporter ATP-binding protein Proteus mirabilis HI4320