COG4536


Help to interpret the results

Three outputs have been generated:
General: this result contains the description and frequency of the selected COG entries COG4536, of which KO pathways and KO modules it is part. Additionally, its occurence in the database is reported.
Proteins list: list of occurences of the COG entries within the database. 7 occurences are identified. The table reports the orthogroup, the organism in which each occurrence has been found, and the locus tag enriched by start and stop position, strand, gene name and product.
Clicking on the Ortohgroup name or locus you will be redirected to further info.
Profiles: Phylogenetic tree annotated with
- the presence of the COG entry(ies) of interest within all the genomes of the database (first column)
- the size of the orthogroup(s) in which the reported COG entries has been clustered.
In red the COG entries with positive hit(s) in the corresponding genome.
In green the discrepencies between orthogroup clustering and COG entries prediction. Green homologs (same orthogroup) are not positive hit(s) for the considered COG entries.

Variations within orthogroups may be due to the clustering of multi domain proteins or because of erroneous homolog clustering or COG entries prediction.

Description

Description Mg2+ and Co2+ transporter CorB, contains DUF21, CBS pair, and CorC-HlyC domains
Function(s) descr. Inorganic ion transport and metabolism (P)

Occurence in the database

COG4536 is associated with 7 different proteins (see tab "Protein list" and "Profile")
The 7 proteins are classified into 1 different orthogroup(s)
# Orthogroup Locus Start Stop S. Gene Product Organism
0 group_2038 FBDBKF_15290 66463 67755 -1 corB Mg2+ and Co2+ transporter CorB, contains DUF21, CBS pair, and CorC-HlyC domains Morganella morganii S1
1 group_2038 EHELCC_10955 17151 18443 1 corB Mg2+ and Co2+ transporter CorB, contains DUF21, CBS pair, and CorC-HlyC domains Morganella morganii S2
2 group_2038 NLDBIP_11300 17151 18443 1 corB Mg2+ and Co2+ transporter CorB, contains DUF21, CBS pair, and CorC-HlyC domains Morganella morganii S4
3 group_2038 LHKJJB_11160 17151 18443 1 corB Mg2+ and Co2+ transporter CorB, contains DUF21, CBS pair, and CorC-HlyC domains Morganella morganii S3
4 group_2038 HKOGLL_09770 17151 18443 1 corB Mg2+ and Co2+ transporter CorB, contains DUF21, CBS pair, and CorC-HlyC domains Morganella morganii S5
5 group_2038 F4V73_RS12160 16483 17775 1 CNNM domain-containing protein Morganella psychrotolerans
6 group_2038 PMI_RS01845 434235 435509 -1 HlyC/CorC family transporter Proteus mirabilis HI4320