COG4227


Help to interpret the results

Three outputs have been generated:
General: this result contains the description and frequency of the selected COG entries COG4227, of which KO pathways and KO modules it is part. Additionally, its occurence in the database is reported.
Proteins list: list of occurences of the COG entries within the database. 16 occurences are identified. The table reports the orthogroup, the organism in which each occurrence has been found, and the locus tag enriched by start and stop position, strand, gene name and product.
Clicking on the Ortohgroup name or locus you will be redirected to further info.
Profiles: Phylogenetic tree annotated with
- the presence of the COG entry(ies) of interest within all the genomes of the database (first column)
- the size of the orthogroup(s) in which the reported COG entries has been clustered.
In red the COG entries with positive hit(s) in the corresponding genome.
In green the discrepencies between orthogroup clustering and COG entries prediction. Green homologs (same orthogroup) are not positive hit(s) for the considered COG entries.

Variations within orthogroups may be due to the clustering of multi domain proteins or because of erroneous homolog clustering or COG entries prediction.

Description

Description Antirestriction protein ArdC
Function(s) descr. Replication, recombination and repair (L)

Occurence in the database

COG4227 is associated with 16 different proteins (see tab "Protein list" and "Profile")
The 16 proteins are classified into 3 different orthogroup(s)
# Orthogroup Locus Start Stop S. Gene Product Organism
0 group_2624 FBDBKF_03860 175794 176768 -1 ardC Antirestriction protein ArdC Morganella morganii S1
1 group_3509 FBDBKF_17950 27527 27874 -1 ardC Antirestriction protein ArdC Morganella morganii S1
2 group_3510 FBDBKF_17955 28046 28222 -1 Antirestriction protein Morganella morganii S1
3 group_3510 EHELCC_06380 8154 8330 1 Antirestriction protein Morganella morganii S2
4 group_3509 EHELCC_06385 8502 8849 1 ardC Antirestriction protein ArdC Morganella morganii S2
5 group_2624 EHELCC_06675 70335 71309 1 ardC Antirestriction protein ArdC Morganella morganii S2
6 group_3510 NLDBIP_06700 8027 8203 1 Antirestriction protein Morganella morganii S4
7 group_3509 NLDBIP_06705 8375 8722 1 ardC Antirestriction protein ArdC Morganella morganii S4
8 group_2624 NLDBIP_07000 70208 71182 1 ardC Antirestriction protein ArdC Morganella morganii S4
9 group_2624 LHKJJB_06535 33954 34928 1 ardC Antirestriction protein ArdC Morganella morganii S3
10 group_3510 LHKJJB_19300 7938 8114 1 Antirestriction protein Morganella morganii S3
11 group_3509 LHKJJB_19305 8286 8633 1 ardC Antirestriction protein ArdC Morganella morganii S3
12 group_2624 HKOGLL_04395 198459 199433 -1 ardC Antirestriction protein ArdC Morganella morganii S5
13 group_3509 HKOGLL_04685 260919 261266 -1 ardC Antirestriction protein ArdC Morganella morganii S5
14 group_3510 HKOGLL_04690 261438 261614 -1 Antirestriction protein Morganella morganii S5
15 group_2624 PMI_RS12635 2798718 2799692 -1 zincin-like metallopeptidase domain-containing protein Proteus mirabilis HI4320