Homologs in group_2624

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5 homologs were identified in 5 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product
FBDBKF_03860 FBDBKF_03860 100.0 Morganella morganii S1 ardC Antirestriction protein ArdC
NLDBIP_07000 NLDBIP_07000 100.0 Morganella morganii S4 ardC Antirestriction protein ArdC
LHKJJB_06535 LHKJJB_06535 100.0 Morganella morganii S3 ardC Antirestriction protein ArdC
HKOGLL_04395 HKOGLL_04395 100.0 Morganella morganii S5 ardC Antirestriction protein ArdC
PMI_RS12635 PMI_RS12635 99.7 Proteus mirabilis HI4320 - zincin-like metallopeptidase domain-containing protein

Distribution of the homologs in the orthogroup group_2624

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Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

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Phylogeny of the RefSeq best hits of group_2624

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism
P55426 1.47e-44 157 35 10 303 4 NGR_a03900 Uncharacterized protein y4eC Sinorhizobium fredii (strain NBRC 101917 / NGR234)
P27190 1.47e-44 166 35 7 314 1 traC DNA primase TraC Escherichia coli
P27189 1.74e-43 162 34 7 306 1 traC DNA primase TraC Escherichia coli

  • Number of RefSeq hits:

General

Source Morganella morganii S2
Locus tag EHELCC_06675
Feature type CDS
Gene ardC
Product Antirestriction protein ArdC
Location 70335 - 71309 (strand: 1)
Length 975 (nucleotides) / 324 (amino acids)

Contig

Accession ZDB_216
Length 269970 nucleotides
Topology linear
Plasmid False

Orthology

Orthogroup group_2624
Orthogroup size 6
N. genomes 6

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Genomic region

Domains

PF08401 N-terminal domain of anti-restriction factor ArdC
PF18818 Zincin-like metallopeptidase

COG entry Annotation(s)

ID Function(s) descr. Function(s) cat. Description
COG4227 Replication, recombination and repair (L) L Antirestriction protein ArdC

Protein Sequence

MKKSDRKRRPAADKPVRDIYQEVTDRIVAALEKGTRPWKRPWRPSEGTGTGFPVNALTGHSYQGINVLLLWLSAAEQGFGYDIWLTYRQAQQLGGHVRKGEMATNTVIFKPVKVPAKDRHGELLRDEHGEVVMTEVPMIKANPLFNIAQCDDLPAHFYENRRLPGEETAGITLPATHRVLDILNASGVKVTSAAQNRAYYSPSQDRIVMPLSSQFDRNADYQATLLHELVHSTGHPSRLAREGITSSSLKFGDPLYSFEELVAEMGSAFLCAQLSVEGEVNHESYLDSWLRVLKSDKKALFRAAGQARQACEFLLNEAASRQAA

Flanking regions ( +/- flanking 50bp)

TGTATCTCACCGTCAGGACGGGATACACCTTTTTTATTGAGGGTATTCCGATGAAAAAATCTGACCGTAAACGCCGTCCGGCAGCGGATAAGCCGGTTCGCGATATTTATCAGGAAGTGACTGACCGTATTGTGGCCGCGCTGGAAAAAGGCACCCGTCCGTGGAAACGACCATGGCGGCCGTCGGAAGGGACAGGCACCGGTTTTCCGGTGAACGCCCTGACCGGTCATTCCTACCAGGGGATAAATGTGCTGCTGTTATGGTTGTCGGCGGCGGAGCAGGGCTTTGGTTACGATATCTGGCTGACTTACCGTCAGGCACAGCAACTGGGTGGCCATGTCCGTAAAGGCGAAATGGCGACGAATACTGTGATATTCAAACCGGTGAAGGTGCCGGCAAAAGACCGTCACGGTGAGCTGCTGCGGGATGAACACGGTGAGGTGGTGATGACGGAGGTGCCGATGATAAAGGCGAATCCGTTATTTAACATAGCCCAGTGTGATGACCTGCCGGCGCATTTTTACGAAAACCGGCGACTACCCGGAGAGGAGACAGCAGGGATAACCCTGCCGGCCACGCACCGGGTGCTGGATATCCTGAATGCCAGCGGCGTGAAGGTGACCAGTGCGGCGCAGAACCGGGCGTATTACAGTCCGTCACAGGACCGGATTGTGATGCCGCTGTCGTCACAGTTTGACCGGAATGCCGATTACCAGGCCACCTTACTGCATGAGTTGGTGCACAGTACCGGTCATCCGTCCAGGCTGGCCCGTGAAGGCATCACCTCATCGTCCCTGAAGTTTGGTGACCCGCTGTACAGTTTTGAGGAGCTGGTTGCGGAAATGGGCAGCGCTTTTCTTTGTGCGCAGTTAAGCGTCGAGGGAGAAGTGAACCATGAAAGCTATCTTGACAGCTGGCTGCGGGTACTGAAATCGGACAAAAAAGCGTTGTTCCGGGCCGCCGGGCAGGCCCGCCAGGCCTGTGAGTTTTTACTGAATGAGGCCGCATCCCGACAGGCCGCGTAGGAGACTGCGATGAACAAAATGACCATTATCCGCTTTCAGTTACTGGTACA