COG3895


Help to interpret the results

Three outputs have been generated:
General: this result contains the description and frequency of the selected COG entries COG3895, of which KO pathways and KO modules it is part. Additionally, its occurence in the database is reported.
Proteins list: list of occurences of the COG entries within the database. 17 occurences are identified. The table reports the orthogroup, the organism in which each occurrence has been found, and the locus tag enriched by start and stop position, strand, gene name and product.
Clicking on the Ortohgroup name or locus you will be redirected to further info.
Profiles: Phylogenetic tree annotated with
- the presence of the COG entry(ies) of interest within all the genomes of the database (first column)
- the size of the orthogroup(s) in which the reported COG entries has been clustered.
In red the COG entries with positive hit(s) in the corresponding genome.
In green the discrepencies between orthogroup clustering and COG entries prediction. Green homologs (same orthogroup) are not positive hit(s) for the considered COG entries.

Variations within orthogroups may be due to the clustering of multi domain proteins or because of erroneous homolog clustering or COG entries prediction.

Description

Description Membrane-bound inhibitor of C-type lysozyme
Function(s) descr. Cell wall/membrane/envelope biogenesis (M)

Occurence in the database

COG3895 is associated with 17 different proteins (see tab "Protein list" and "Profile")
The 17 proteins are classified into 3 different orthogroup(s)
# Orthogroup Locus Start Stop S. Gene Product Organism
0 group_3134 FBDBKF_00005 362 697 1 c-type lysozyme inhibitor Morganella morganii S1
1 group_449 FBDBKF_00565 94442 94633 -1 mliC Membrane-bound inhibitor of C-type lysozyme Morganella morganii S1
2 group_3101 FBDBKF_19900 3633 3791 -1 Lipoprotein Morganella morganii S1
3 group_449 EHELCC_00980 214235 214426 1 mliC Membrane-bound inhibitor of C-type lysozyme Morganella morganii S2
4 group_3134 EHELCC_01540 308171 308506 -1 c-type lysozyme inhibitor Morganella morganii S2
5 group_3101 EHELCC_07715 11631 11789 1 Lipoprotein Morganella morganii S2
6 group_3134 NLDBIP_01920 371630 371965 1 c-type lysozyme inhibitor Morganella morganii S4
7 group_449 NLDBIP_02480 465710 465901 -1 mliC Membrane-bound inhibitor of C-type lysozyme Morganella morganii S4
8 group_3101 NLDBIP_08040 11631 11789 1 Lipoprotein Morganella morganii S4
9 group_3134 LHKJJB_00115 20720 21055 -1 c-type lysozyme inhibitor Morganella morganii S3
10 group_449 LHKJJB_03995 72951 73142 -1 mliC Membrane-bound inhibitor of C-type lysozyme Morganella morganii S3
11 group_3101 LHKJJB_06225 245370 245528 -1 Lipoprotein Morganella morganii S3
12 group_3134 HKOGLL_00155 26231 26566 -1 c-type lysozyme inhibitor Morganella morganii S5
13 group_449 HKOGLL_03050 214440 214631 1 mliC Membrane-bound inhibitor of C-type lysozyme Morganella morganii S5
14 group_3101 HKOGLL_19080 3639 3797 -1 Lipoprotein Morganella morganii S5
15 group_449 F4V73_RS06580 1371574 1371912 -1 MliC family protein Morganella psychrotolerans
16 group_449 PMI_RS03955 891648 891980 1 MliC family protein Proteus mirabilis HI4320