Homologs in group_449

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6 homologs were identified in 6 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product
FBDBKF_00565 FBDBKF_00565 68.3 Morganella morganii S1 mliC Membrane-bound inhibitor of C-type lysozyme
EHELCC_00980 EHELCC_00980 68.3 Morganella morganii S2 mliC Membrane-bound inhibitor of C-type lysozyme
NLDBIP_02480 NLDBIP_02480 68.3 Morganella morganii S4 mliC Membrane-bound inhibitor of C-type lysozyme
LHKJJB_03995 LHKJJB_03995 68.3 Morganella morganii S3 mliC Membrane-bound inhibitor of C-type lysozyme
HKOGLL_03050 HKOGLL_03050 68.3 Morganella morganii S5 mliC Membrane-bound inhibitor of C-type lysozyme
F4V73_RS06580 F4V73_RS06580 68.2 Morganella psychrotolerans - MliC family protein

Distribution of the homologs in the orthogroup group_449

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Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

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Phylogeny of the RefSeq best hits of group_449

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism
Q0K8S4 0.00022 41 36 2 57 3 mliC Membrane-bound lysozyme inhibitor of C-type lysozyme Cupriavidus necator (strain ATCC 17699 / DSM 428 / KCTC 22496 / NCIMB 10442 / H16 / Stanier 337)
P28224 0.000808 39 32 1 61 1 mliC Membrane-bound lysozyme inhibitor of C-type lysozyme Escherichia coli (strain K12)

  • Number of RefSeq hits:

General

Source Proteus mirabilis HI4320
Locus tag PMI_RS03955
Feature type CDS
Gene -
Product MliC family protein
Location 891648 - 891980 (strand: 1)
Length 333 (nucleotides) / 110 (amino acids)

Contig

Accession NC_010554
Length 4063606 nucleotides
Topology circular
Plasmid False

Orthology

Orthogroup group_449
Orthogroup size 7
N. genomes 7

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Genomic region

Domains

PF09864 Membrane-bound lysozyme-inhibitor of c-type lysozyme

COG entry Annotation(s)

ID Function(s) descr. Function(s) cat. Description
COG3895 Cell wall/membrane/envelope biogenesis (M) M Membrane-bound inhibitor of C-type lysozyme

Protein Sequence

MRKLLSISAIALLTSIIATPALAAKTETYDCEGQKIRVSFPNDDLAVMDYNDELIVLKSAVAASGARYVGESFQLWGKGSEEFNLATMSEDEIVNDLIAEDTGRTCKIVK

Flanking regions ( +/- flanking 50bp)

TAACCTAATTGGACTAACCATAGTTACTTTAATTATTTTAGGAGATGTAAATGCGTAAATTACTTTCTATCTCTGCAATTGCTTTATTAACTTCAATTATTGCAACACCTGCATTAGCTGCTAAAACAGAAACTTACGACTGTGAAGGGCAAAAAATCAGAGTTTCTTTCCCTAATGATGATTTGGCCGTAATGGATTATAATGATGAATTAATCGTGTTAAAATCTGCCGTCGCTGCAAGTGGTGCGCGTTATGTTGGAGAAAGTTTCCAACTGTGGGGTAAAGGTAGTGAAGAGTTCAATTTAGCGACGATGTCAGAAGATGAAATAGTTAATGATCTTATTGCTGAAGATACAGGGCGTACTTGTAAAATAGTAAAATAATTTAATGATTATTTATTGAGATAAAGGCGAGCTAGACTCGCCTTTATTTT