Orthogroup:group_525


Homologs in group_525

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7 homologs were identified in 7 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Source Gene Product
FBDBKF_01130 FBDBKF_01130 Morganella morganii S1 iscU Fe-S cluster assembly scaffold protein IscU, NifU family
EHELCC_00415 EHELCC_00415 Morganella morganii S2 iscU Fe-S cluster assembly scaffold protein IscU, NifU family
NLDBIP_03045 NLDBIP_03045 Morganella morganii S4 iscU Fe-S cluster assembly scaffold protein IscU, NifU family
LHKJJB_04560 LHKJJB_04560 Morganella morganii S3 iscU Fe-S cluster assembly scaffold protein IscU, NifU family
HKOGLL_02485 HKOGLL_02485 Morganella morganii S5 iscU Fe-S cluster assembly scaffold protein IscU, NifU family
F4V73_RS07200 F4V73_RS07200 Morganella psychrotolerans iscU Fe-S cluster assembly scaffold IscU
PMI_RS09175 PMI_RS09175 Proteus mirabilis HI4320 iscU Fe-S cluster assembly scaffold IscU

Distribution of group_525 homologs

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Number of homologs in each genome (first column and blue bar chart)

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Phylogeny of group_525 (midpoint rooted)


Phylogeny of the RefSeq best hits of group_525

Orthogroup content: 7 members

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This page summarizes the annotation of all members of the orthologous group group_525.
Gene name(s), gene product(s), a summary of protein lenght, and annotations (when available) are provided. Additionally, the number of times (occurence) an annotation is observed in the orthogroup is reported for each annotation.

Orthologs were identified with OrthoFinder. The annotation of orthologous proteins can differ depending the approach used to annotate the source genomes. Automated annotations are also subject to errors. Spurious clustering of non-orthologous proteins can also happen. This page allows to check for eventual inconsistencies.

Gene

# Gene name Occurence
1 iscU 7

Product

# Product Occurence
1 Fe-S cluster assembly scaffold protein IscU, NifU family 5
2 Fe-S cluster assembly scaffold IscU 2

COG entry Annotation(s)

ID Occurences Function(s) cat. Function(s) descr. Description
COG0822 7 O Posttranslational modification, protein turnover, chaperones (O) Fe-S cluster assembly scaffold protein IscU, NifU family

Kegg Ortholog Annotation(s)

KO Occurences Description Pathways Modules
K04488 7 nitrogen fixation protein NifU and related proteins - -

Pfam domain Annotation(s)

Domain ID Occurences Description
PF01592 7 NifU-like N terminal domain

Annotations of the 40 SwissProt hits

Annotation Number of occurrences
Bifunctional protein NifU/MnmA 1
Iron sulfur cluster assembly protein 1 2
Iron sulfur cluster assembly protein 1, mitochondrial 7
Iron sulfur cluster assembly protein 2, mitochondrial 1
Iron-sulfur cluster assembly enzyme ISCU 2
Iron-sulfur cluster assembly protein 1 2
Iron-sulfur cluster assembly protein 2 1
Iron-sulfur cluster assembly protein 3 1
Iron-sulfur cluster assembly scaffold protein IscU 13
Iron-sulfur cluster assembly scaffold protein IscU 1 1
Iron-sulfur cluster assembly scaffold protein IscU 2 1
Nitrogen fixation protein NifU 7
Zinc-dependent sulfurtransferase SufU 1

Protein length

Unique protein length 128

Protein length distribution