Orthogroup:group_3129


Homologs in group_3129

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6 homologs were identified in 6 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Source Gene Product
FBDBKF_20050 FBDBKF_20050 Morganella morganii S1 fimH Pilin (type 1 fimbrial protein)
EHELCC_03480 EHELCC_03480 Morganella morganii S2 fimH Pilin (type 1 fimbrial protein)
NLDBIP_03480 NLDBIP_03480 Morganella morganii S4 fimH Pilin (type 1 fimbrial protein)
LHKJJB_09310 LHKJJB_09310 Morganella morganii S3 fimH Pilin (type 1 fimbrial protein)
HKOGLL_09665 HKOGLL_09665 Morganella morganii S5 fimH Pilin (type 1 fimbrial protein)
F4V73_RS01670 F4V73_RS01670 Morganella psychrotolerans - fimbrial protein

Distribution of group_3129 homologs

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Number of homologs in each genome (first column and blue bar chart)

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Phylogeny of group_3129 (midpoint rooted)


Phylogeny of the RefSeq best hits of group_3129

Orthogroup content: 6 members

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This page summarizes the annotation of all members of the orthologous group group_3129.
Gene name(s), gene product(s), a summary of protein lenght, and annotations (when available) are provided. Additionally, the number of times (occurence) an annotation is observed in the orthogroup is reported for each annotation.

Orthologs were identified with OrthoFinder. The annotation of orthologous proteins can differ depending the approach used to annotate the source genomes. Automated annotations are also subject to errors. Spurious clustering of non-orthologous proteins can also happen. This page allows to check for eventual inconsistencies.

Gene

# Gene name Occurence
1 fimH 5
2 - 1

Product

# Product Occurence
1 Pilin (type 1 fimbrial protein) 5
2 fimbrial protein 1

COG entry Annotation(s)

ID Occurences Function(s) cat. Function(s) descr. Description
COG3539 6 N Cell motility (N) Pilin (type 1 fimbrial protein)

Kegg Ortholog Annotation(s)

KO Occurences Description Pathways Modules
K07350 6 minor fimbrial subunit - -

Pfam domain Annotation(s)

Domain ID Occurences Description
PF00419 6 Fimbrial protein

Virulence factor Annotation(s)

VF gene ID Occurences Protein VF ID Category
VFG042683 1 fimbrial adhesin subunit VF1211 Adherence

Annotations of the 7 SwissProt hits

Annotation Number of occurrences
Probable minor fimbrial subunit LpfD 1
Protein LpfD 1
Type 1 fimbrin D-mannose specific adhesin 1
Uncharacterized fimbrial-like protein ElfG 2
Uncharacterized fimbrial-like protein SfmH 1
Uncharacterized fimbrial-like protein YraK 1

Protein length

Unique protein length 332

Protein length distribution