COG3784


Help to interpret the results

Three outputs have been generated:
General: this result contains the description and frequency of the selected COG entries COG3784, of which KO pathways and KO modules it is part. Additionally, its occurence in the database is reported.
Proteins list: list of occurences of the COG entries within the database. 7 occurences are identified. The table reports the orthogroup, the organism in which each occurrence has been found, and the locus tag enriched by start and stop position, strand, gene name and product.
Clicking on the Ortohgroup name or locus you will be redirected to further info.
Profiles: Phylogenetic tree annotated with
- the presence of the COG entry(ies) of interest within all the genomes of the database (first column)
- the size of the orthogroup(s) in which the reported COG entries has been clustered.
In red the COG entries with positive hit(s) in the corresponding genome.
In green the discrepencies between orthogroup clustering and COG entries prediction. Green homologs (same orthogroup) are not positive hit(s) for the considered COG entries.

Variations within orthogroups may be due to the clustering of multi domain proteins or because of erroneous homolog clustering or COG entries prediction.

Description

Description Uncharacterized conserved protein YdbL, DUF1318 family
Function(s) descr. Function unknown (S)

Occurence in the database

COG3784 is associated with 7 different proteins (see tab "Protein list" and "Profile")
The 7 proteins are classified into 1 different orthogroup(s)
# Orthogroup Locus Start Stop S. Gene Product Organism
0 group_663 FBDBKF_02355 161352 161690 1 ydbL DUF1318 domain-containing protein Morganella morganii S1
1 group_663 EHELCC_02825 549172 549510 1 ydbL DUF1318 domain-containing protein Morganella morganii S2
2 group_663 NLDBIP_00635 130626 130964 -1 ydbL DUF1318 domain-containing protein Morganella morganii S4
3 group_663 LHKJJB_01400 261721 262059 1 ydbL DUF1318 domain-containing protein Morganella morganii S3
4 group_663 HKOGLL_01440 267232 267570 1 ydbL DUF1318 domain-containing protein Morganella morganii S5
5 group_663 F4V73_RS04735 1000087 1000383 1 YdbL family protein Morganella psychrotolerans
6 group_663 PMI_RS05715 1245358 1245690 1 YdbL family protein Proteus mirabilis HI4320