COG3150


Help to interpret the results

Three outputs have been generated:
General: this result contains the description and frequency of the selected COG entries COG3150, of which KO pathways and KO modules it is part. Additionally, its occurence in the database is reported.
Proteins list: list of occurences of the COG entries within the database. 14 occurences are identified. The table reports the orthogroup, the organism in which each occurrence has been found, and the locus tag enriched by start and stop position, strand, gene name and product.
Clicking on the Ortohgroup name or locus you will be redirected to further info.
Profiles: Phylogenetic tree annotated with
- the presence of the COG entry(ies) of interest within all the genomes of the database (first column)
- the size of the orthogroup(s) in which the reported COG entries has been clustered.
In red the COG entries with positive hit(s) in the corresponding genome.
In green the discrepencies between orthogroup clustering and COG entries prediction. Green homologs (same orthogroup) are not positive hit(s) for the considered COG entries.

Variations within orthogroups may be due to the clustering of multi domain proteins or because of erroneous homolog clustering or COG entries prediction.

Description

Description Predicted esterase YcpF, UPF0227 family
Function(s) descr. General function prediction only (R)

Occurence in the database

COG3150 is associated with 14 different proteins (see tab "Protein list" and "Profile")
The 14 proteins are classified into 2 different orthogroup(s)
# Orthogroup Locus Start Stop S. Gene Product Organism
0 group_1108 FBDBKF_06315 97513 98091 -1 yqiA esterase YqiA Morganella morganii S1
1 group_1953 FBDBKF_14655 31184 31732 -1 ycfP alpha/beta hydrolase YcfP Morganella morganii S1
2 group_1108 EHELCC_09360 98085 98663 -1 yqiA esterase YqiA Morganella morganii S2
3 group_1953 EHELCC_15460 61260 61808 -1 ycfP alpha/beta hydrolase YcfP Morganella morganii S2
4 group_1108 NLDBIP_09740 98085 98663 -1 yqiA esterase YqiA Morganella morganii S4
5 group_1953 NLDBIP_15990 61260 61808 -1 ycfP alpha/beta hydrolase YcfP Morganella morganii S4
6 group_1108 LHKJJB_08015 118575 119153 1 yqiA esterase YqiA Morganella morganii S3
7 group_1953 LHKJJB_15850 54878 55426 1 ycfP alpha/beta hydrolase YcfP Morganella morganii S3
8 group_1108 HKOGLL_07565 118575 119153 1 yqiA esterase YqiA Morganella morganii S5
9 group_1953 HKOGLL_14970 54090 54638 1 ycfP alpha/beta hydrolase YcfP Morganella morganii S5
10 group_1953 F4V73_RS07450 1559826 1560374 -1 ycfP alpha/beta hydrolase YcfP Morganella psychrotolerans
11 group_1108 F4V73_RS15605 115993 116574 1 yqiA esterase YqiA Morganella psychrotolerans
12 group_1953 PMI_RS04290 961525 962070 1 ycfP alpha/beta hydrolase YcfP Proteus mirabilis HI4320
13 group_1108 PMI_RS11605 2564865 2565455 -1 yqiA esterase YqiA Proteus mirabilis HI4320