Orthogroup:group_1170


Homologs in group_1170

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7 homologs were identified in 7 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Source Gene Product
FBDBKF_06725 FBDBKF_06725 Morganella morganii S1 rhtA threonine/homoserine exporter RhtA
EHELCC_04245 EHELCC_04245 Morganella morganii S2 rhtA threonine/homoserine exporter RhtA
NLDBIP_04245 NLDBIP_04245 Morganella morganii S4 rhtA threonine/homoserine exporter RhtA
LHKJJB_10075 LHKJJB_10075 Morganella morganii S3 rhtA threonine/homoserine exporter RhtA
HKOGLL_08900 HKOGLL_08900 Morganella morganii S5 rhtA threonine/homoserine exporter RhtA
F4V73_RS00880 F4V73_RS00880 Morganella psychrotolerans rhtA threonine/homoserine exporter RhtA
PMI_RS03115 PMI_RS03115 Proteus mirabilis HI4320 rhtA threonine/homoserine exporter RhtA

Distribution of group_1170 homologs

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Number of homologs in each genome (first column and blue bar chart)

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Phylogeny of group_1170 (midpoint rooted)


Phylogeny of the RefSeq best hits of group_1170

Orthogroup content: 7 members

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This page summarizes the annotation of all members of the orthologous group group_1170.
Gene name(s), gene product(s), a summary of protein lenght, and annotations (when available) are provided. Additionally, the number of times (occurence) an annotation is observed in the orthogroup is reported for each annotation.

Orthologs were identified with OrthoFinder. The annotation of orthologous proteins can differ depending the approach used to annotate the source genomes. Automated annotations are also subject to errors. Spurious clustering of non-orthologous proteins can also happen. This page allows to check for eventual inconsistencies.

Gene

# Gene name Occurence
1 rhtA 7

Product

# Product Occurence
1 threonine/homoserine exporter RhtA 7

COG entry Annotation(s)

ID Occurences Function(s) cat. Function(s) descr. Description
COG5006 7 E Amino acid transport and metabolism (E) Threonine/homoserine efflux transporter RhtA

Kegg Ortholog Annotation(s)

KO Occurences Description Pathways Modules
K11939 7 inner membrane transporter RhtA - -

Pfam domain Annotation(s)

Domain ID Occurences Description
PF00892 7 EamA-like transporter family

Annotations of the 6 SwissProt hits

Annotation Number of occurrences
Threonine/homoserine exporter RhtA 5
Uncharacterized transporter YwfM 1

Protein length

Min length 296
Max length 299
Mean length (sd) 298.6 (1.1)
Median length 299.0

Protein length distribution