Homologs in group_1108

Help

6 homologs were identified in 6 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product
FBDBKF_06315 FBDBKF_06315 84.9 Morganella morganii S1 yqiA esterase YqiA
EHELCC_09360 EHELCC_09360 84.9 Morganella morganii S2 yqiA esterase YqiA
NLDBIP_09740 NLDBIP_09740 84.9 Morganella morganii S4 yqiA esterase YqiA
LHKJJB_08015 LHKJJB_08015 84.9 Morganella morganii S3 yqiA esterase YqiA
HKOGLL_07565 HKOGLL_07565 84.9 Morganella morganii S5 yqiA esterase YqiA
PMI_RS11605 PMI_RS11605 59.1 Proteus mirabilis HI4320 yqiA esterase YqiA

Distribution of the homologs in the orthogroup group_1108

Help

Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

Download SVG

Phylogeny of the RefSeq best hits of group_1108

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism
P0A900 2.93e-89 263 65 0 190 3 yqiA Esterase YqiA Shigella flexneri
P0A8Z7 2.93e-89 263 65 0 190 4 yqiA Esterase YqiA Escherichia coli (strain K12)
P0A8Z8 2.93e-89 263 65 0 190 3 yqiA Esterase YqiA Escherichia coli O6:H1 (strain CFT073 / ATCC 700928 / UPEC)
P0A8Z9 2.93e-89 263 65 0 190 3 yqiA Esterase YqiA Escherichia coli O157:H7
B5BAG6 0.00024 43 23 6 194 3 ycfP UPF0227 protein YcfP Salmonella paratyphi A (strain AKU_12601)
Q5PGR9 0.00024 43 23 6 194 3 ycfP UPF0227 protein YcfP Salmonella paratyphi A (strain ATCC 9150 / SARB42)

  • Number of RefSeq hits:

General

Source Morganella psychrotolerans
Locus tag F4V73_RS15605
Feature type CDS
Gene yqiA
Product esterase YqiA
Location 115993 - 116574 (strand: 1)
Length 582 (nucleotides) / 193 (amino acids)

Contig

Accession term accessions NZ_VXKB01000005 accessions NZ_VXKB01000000 Name: value, dtype: object
Length 213534 nucleotides
Topology linear
Plasmid False

Orthology

Orthogroup group_1108
Orthogroup size 7
N. genomes 7

Actions

Genomic region

Domains

PF05728 Uncharacterised protein family (UPF0227)

COG entry Annotation(s)

ID Function(s) descr. Function(s) cat. Description
COG3150 General function prediction only (R) R Predicted esterase YcpF, UPF0227 family

Kegg Ortholog Annotation(s)

KO Description Pathways Modules
K07000 uncharacterized protein - -

Protein Sequence

MATLLYLHGFNSSPLSEKGMMLKSWLAEHHPEIRMVIPQLPCYPDEAALYLENLMSSLAGENTGIVGSSLGGYFAIWLSQTFDVPAVVVNPAVYPFELLQNYLGENVNPYTHERYTLEPRHMQDLRAVYIDSPESPDLIWLLQQTGDEVLDYRQAVTHLVACKQTIESGGSHAFTGFPQYFPQIINFLGLGNN

Flanking regions ( +/- flanking 50bp)

CGCCTGGATACTGACGAATTCAGCCCTGATCTGGGCTCGGAAGGTTACTGATGGCGACGCTCCTTTATCTGCACGGCTTTAACAGCTCTCCATTGTCAGAAAAAGGAATGATGCTGAAATCCTGGCTGGCAGAACATCACCCGGAGATCCGGATGGTTATCCCGCAACTTCCCTGCTATCCGGATGAGGCCGCCCTCTATCTGGAAAACCTGATGAGCTCTCTGGCCGGTGAAAATACCGGAATTGTCGGCTCTTCTCTGGGAGGTTATTTTGCGATCTGGTTATCGCAGACATTTGATGTTCCCGCAGTAGTAGTTAATCCGGCGGTTTATCCTTTTGAATTACTTCAGAATTATTTAGGGGAGAATGTTAACCCCTATACACATGAACGCTACACACTTGAACCCCGCCACATGCAGGATTTACGGGCTGTGTATATTGATTCACCTGAATCACCGGATTTGATCTGGTTATTACAGCAGACCGGCGACGAAGTACTTGATTACCGTCAGGCGGTCACGCATCTGGTGGCGTGTAAACAAACGATTGAATCCGGCGGAAGTCACGCCTTTACAGGTTTTCCTCAGTATTTTCCGCAGATAATTAATTTCCTCGGACTCGGCAATAACTGAAAACCATGTTTTAATTTCCCTGTGACTGGTATTATCGCCAGTATCACTCA