COG3067


Help to interpret the results

Three outputs have been generated:
General: this result contains the description and frequency of the selected COG entries COG3067, of which KO pathways and KO modules it is part. Additionally, its occurence in the database is reported.
Proteins list: list of occurences of the COG entries within the database. 7 occurences are identified. The table reports the orthogroup, the organism in which each occurrence has been found, and the locus tag enriched by start and stop position, strand, gene name and product.
Clicking on the Ortohgroup name or locus you will be redirected to further info.
Profiles: Phylogenetic tree annotated with
- the presence of the COG entry(ies) of interest within all the genomes of the database (first column)
- the size of the orthogroup(s) in which the reported COG entries has been clustered.
In red the COG entries with positive hit(s) in the corresponding genome.
In green the discrepencies between orthogroup clustering and COG entries prediction. Green homologs (same orthogroup) are not positive hit(s) for the considered COG entries.

Variations within orthogroups may be due to the clustering of multi domain proteins or because of erroneous homolog clustering or COG entries prediction.

Description

Description Na+/H+ antiporter NhaB
Function(s) descr. Energy production and conversion (C)
Inorganic ion transport and metabolism (P)

Occurence in the database

COG3067 is associated with 7 different proteins (see tab "Protein list" and "Profile")
The 7 proteins are classified into 1 different orthogroup(s)
# Orthogroup Locus Start Stop S. Gene Product Organism
0 group_990 FBDBKF_05480 106610 108157 1 nhaB sodium/proton antiporter NhaB Morganella morganii S1
1 group_990 EHELCC_12110 73337 74884 -1 nhaB sodium/proton antiporter NhaB Morganella morganii S2
2 group_990 NLDBIP_12450 73292 74839 -1 nhaB sodium/proton antiporter NhaB Morganella morganii S4
3 group_990 LHKJJB_12310 73337 74884 -1 nhaB sodium/proton antiporter NhaB Morganella morganii S3
4 group_990 HKOGLL_10925 73337 74884 -1 nhaB sodium/proton antiporter NhaB Morganella morganii S5
5 group_990 F4V73_RS03820 807514 809061 -1 nhaB sodium/proton antiporter NhaB Morganella psychrotolerans
6 group_990 PMI_RS07325 1605160 1606704 1 nhaB sodium/proton antiporter NhaB Proteus mirabilis HI4320