COG1932


Help to interpret the results

Three outputs have been generated:
General: this result contains the description and frequency of the selected COG entries COG1932, of which KO pathways and KO modules it is part. Additionally, its occurence in the database is reported.
Proteins list: list of occurences of the COG entries within the database. 7 occurences are identified. The table reports the orthogroup, the organism in which each occurrence has been found, and the locus tag enriched by start and stop position, strand, gene name and product.
Clicking on the Ortohgroup name or locus you will be redirected to further info.
Profiles: Phylogenetic tree annotated with
- the presence of the COG entry(ies) of interest within all the genomes of the database (first column)
- the size of the orthogroup(s) in which the reported COG entries has been clustered.
In red the COG entries with positive hit(s) in the corresponding genome.
In green the discrepencies between orthogroup clustering and COG entries prediction. Green homologs (same orthogroup) are not positive hit(s) for the considered COG entries.

Variations within orthogroups may be due to the clustering of multi domain proteins or because of erroneous homolog clustering or COG entries prediction.

Description

Description Phosphoserine aminotransferase
Function(s) descr. Coenzyme transport and metabolism (H)
Amino acid transport and metabolism (E)

Occurence in the database

COG1932 is associated with 7 different proteins (see tab "Protein list" and "Profile")
The 7 proteins are classified into 1 different orthogroup(s)
# Orthogroup Locus Start Stop S. Gene Product Organism
0 group_1226 FBDBKF_07145 100742 101827 1 serC 3-phosphoserine/phosphohydroxythreonine transaminase Morganella morganii S1
1 group_1226 EHELCC_03825 84359 85444 -1 serC 3-phosphoserine/phosphohydroxythreonine transaminase Morganella morganii S2
2 group_1226 NLDBIP_03825 84155 85240 -1 serC 3-phosphoserine/phosphohydroxythreonine transaminase Morganella morganii S4
3 group_1226 LHKJJB_09655 84269 85354 -1 serC 3-phosphoserine/phosphohydroxythreonine transaminase Morganella morganii S3
4 group_1226 HKOGLL_09320 105698 106783 1 serC 3-phosphoserine/phosphohydroxythreonine transaminase Morganella morganii S5
5 group_1226 F4V73_RS01330 288578 289663 1 serC 3-phosphoserine/phosphohydroxythreonine transaminase Morganella psychrotolerans
6 group_1226 PMI_RS03500 779999 781087 1 serC 3-phosphoserine/phosphohydroxythreonine transaminase Proteus mirabilis HI4320