Help to interpret the results
Three outputs have been generated:
General: this tab contains the description, occurence in the database and other information related to the selected COG entry COG1344
Protein list: lists the 22 occurences of the COG entry within the database. The table reports information on each occurence.
Profile: phylogenetic tree annotated with
- the presence of the COG entry of interest within all the genomes of the database (first column)
- the size of the orthogroup(s) in which the reported COG entry has been clustered.
Orthogroups are shown in red if they are annotated with that particular COG entry in a given genome , in green otherwise, i.e. if there is a discrepency between orthogroup clustering and COG entry prediction.
Green homologs (same orthogroup) are not positive hit(s) for the considered COG entry.
Variations within orthogroups may be due to the clustering of multi domain proteins or because of erroneous homolog clustering or COG entry prediction.
| Orthogroup | Locus | Start | Stop | S. | Gene | Product | Organism | |
|---|---|---|---|---|---|---|---|---|
| 0 | group_22 | FBDBKF_00520 | 87351 | 88421 | -1 | Flagellin | Morganella morganii S1 | |
| 1 | group_22 | FBDBKF_00525 | 88652 | 89803 | -1 | flgL | Flagellin and related hook-associated protein FlgL | Morganella morganii S1 |
| 2 | group_540 | FBDBKF_00665 | 110168 | 111115 | -1 | flgL | flagellar hook-associated protein FlgL | Morganella morganii S1 |
| 3 | group_540 | EHELCC_00880 | 197753 | 198700 | 1 | flgL | flagellar hook-associated protein FlgL | Morganella morganii S2 |
| 4 | group_22 | EHELCC_01020 | 219065 | 220216 | 1 | flgL | Flagellin and related hook-associated protein FlgL | Morganella morganii S2 |
| 5 | group_22 | EHELCC_01025 | 220447 | 221517 | 1 | Flagellin | Morganella morganii S2 | |
| 6 | group_22 | NLDBIP_02435 | 458619 | 459689 | -1 | Flagellin | Morganella morganii S4 | |
| 7 | group_22 | NLDBIP_02440 | 459920 | 461071 | -1 | flgL | Flagellin and related hook-associated protein FlgL | Morganella morganii S4 |
| 8 | group_540 | NLDBIP_02580 | 481436 | 482383 | -1 | flgL | flagellar hook-associated protein FlgL | Morganella morganii S4 |
| 9 | group_22 | LHKJJB_03950 | 65860 | 66930 | -1 | Flagellin | Morganella morganii S3 | |
| 10 | group_22 | LHKJJB_03955 | 67161 | 68312 | -1 | flgL | Flagellin and related hook-associated protein FlgL | Morganella morganii S3 |
| 11 | group_540 | LHKJJB_04095 | 88677 | 89624 | -1 | flgL | flagellar hook-associated protein FlgL | Morganella morganii S3 |
| 12 | group_540 | HKOGLL_02950 | 197958 | 198905 | 1 | flgL | flagellar hook-associated protein FlgL | Morganella morganii S5 |
| 13 | group_22 | HKOGLL_03090 | 219270 | 220421 | 1 | flgL | Flagellin and related hook-associated protein FlgL | Morganella morganii S5 |
| 14 | group_22 | HKOGLL_03095 | 220652 | 221722 | 1 | Flagellin | Morganella morganii S5 | |
| 15 | group_22 | F4V73_RS06530 | 1363200 | 1364348 | -1 | FliC/FljB family flagellin | Morganella psychrotolerans | |
| 16 | group_22 | F4V73_RS06535 | 1364590 | 1365726 | -1 | FliC/FljB family flagellin | Morganella psychrotolerans | |
| 17 | group_22 | F4V73_RS06540 | 1365973 | 1367115 | -1 | FliC/FljB family flagellin | Morganella psychrotolerans | |
| 18 | group_540 | F4V73_RS06675 | 1387011 | 1387958 | -1 | flgL | flagellar hook-associated protein FlgL | Morganella psychrotolerans |
| 19 | group_22 | PMI_RS07910 | 1733606 | 1734709 | -1 | FliC/FljB family flagellin | Proteus mirabilis HI4320 | |
| 20 | group_22 | PMI_RS07915 | 1735019 | 1736110 | -1 | FliC/FljB family flagellin | Proteus mirabilis HI4320 | |
| 21 | group_540 | PMI_RS08025 | 1754650 | 1755594 | -1 | flgL | flagellar hook-associated protein FlgL | Proteus mirabilis HI4320 |
