COG1123


Help to interpret the results

Three outputs have been generated:
General: this result contains the description and frequency of the selected COG entries COG1123, of which KO pathways and KO modules it is part. Additionally, its occurence in the database is reported.
Proteins list: list of occurences of the COG entries within the database. 13 occurences are identified. The table reports the orthogroup, the organism in which each occurrence has been found, and the locus tag enriched by start and stop position, strand, gene name and product.
Clicking on the Ortohgroup name or locus you will be redirected to further info.
Profiles: Phylogenetic tree annotated with
- the presence of the COG entry(ies) of interest within all the genomes of the database (first column)
- the size of the orthogroup(s) in which the reported COG entries has been clustered.
In red the COG entries with positive hit(s) in the corresponding genome.
In green the discrepencies between orthogroup clustering and COG entries prediction. Green homologs (same orthogroup) are not positive hit(s) for the considered COG entries.

Variations within orthogroups may be due to the clustering of multi domain proteins or because of erroneous homolog clustering or COG entries prediction.

Description

Description ABC-type glutathione transport system ATPase component, contains duplicated ATPase domain
Function(s) descr. Posttranslational modification, protein turnover, chaperones (O)

Occurence in the database

COG1123 is associated with 13 different proteins (see tab "Protein list" and "Profile")
The 13 proteins are classified into 3 different orthogroup(s)
# Orthogroup Locus Start Stop S. Gene Product Organism
0 group_1163 FBDBKF_06675 174246 175043 -1 gsiA ABC-type glutathione transport system ATPase component, contains duplicated ATPase domain Morganella morganii S1
1 group_13 FBDBKF_08920 1701 2510 -1 nikE nickel import ATP-binding protein NikE Morganella morganii S1
2 group_1163 EHELCC_09720 174818 175615 -1 gsiA ABC-type glutathione transport system ATPase component, contains duplicated ATPase domain Morganella morganii S2
3 group_13 EHELCC_10490 143594 144403 1 nikE nickel import ATP-binding protein NikE Morganella morganii S2
4 group_1163 NLDBIP_10100 174818 175615 -1 gsiA ABC-type glutathione transport system ATPase component, contains duplicated ATPase domain Morganella morganii S4
5 group_13 NLDBIP_10835 121865 122674 1 nikE nickel import ATP-binding protein NikE Morganella morganii S4
6 group_1163 LHKJJB_07655 41623 42420 1 gsiA ABC-type glutathione transport system ATPase component, contains duplicated ATPase domain Morganella morganii S3
7 group_13 LHKJJB_10520 68854 69663 -1 nikE nickel import ATP-binding protein NikE Morganella morganii S3
8 group_1163 HKOGLL_07205 41623 42420 1 gsiA ABC-type glutathione transport system ATPase component, contains duplicated ATPase domain Morganella morganii S5
9 group_13 HKOGLL_13580 2155 2964 -1 nikE nickel import ATP-binding protein NikE Morganella morganii S5
10 group_1163 F4V73_RS15265 39207 40007 1 ATP-binding cassette domain-containing protein Morganella psychrotolerans
11 group_1163 PMI_RS12425 2755584 2756387 -1 ATP-binding cassette domain-containing protein Proteus mirabilis HI4320
12 group_204 PMI_RS14360 3185424 3186131 -1 ATP-binding cassette domain-containing protein Proteus mirabilis HI4320