COG1082


Help to interpret the results

Three outputs have been generated:
General: this result contains the description and frequency of the selected COG entries COG1082, of which KO pathways and KO modules it is part. Additionally, its occurence in the database is reported.
Proteins list: list of occurences of the COG entries within the database. 7 occurences are identified. The table reports the orthogroup, the organism in which each occurrence has been found, and the locus tag enriched by start and stop position, strand, gene name and product.
Clicking on the Ortohgroup name or locus you will be redirected to further info.
Profiles: Phylogenetic tree annotated with
- the presence of the COG entry(ies) of interest within all the genomes of the database (first column)
- the size of the orthogroup(s) in which the reported COG entries has been clustered.
In red the COG entries with positive hit(s) in the corresponding genome.
In green the discrepencies between orthogroup clustering and COG entries prediction. Green homologs (same orthogroup) are not positive hit(s) for the considered COG entries.

Variations within orthogroups may be due to the clustering of multi domain proteins or because of erroneous homolog clustering or COG entries prediction.

Description

Description Sugar phosphate isomerase/epimerase
Function(s) descr. Carbohydrate transport and metabolism (G)

Occurence in the database

COG1082 is associated with 7 different proteins (see tab "Protein list" and "Profile")
The 7 proteins are classified into 1 different orthogroup(s)
# Orthogroup Locus Start Stop S. Gene Product Organism
0 group_1272 FBDBKF_07520 17624 18598 -1 ycjR Sugar phosphate isomerase/epimerase Morganella morganii S1
1 group_1272 EHELCC_17190 45274 46248 -1 ycjR Sugar phosphate isomerase/epimerase Morganella morganii S2
2 group_1272 NLDBIP_13795 12693 13667 -1 ycjR Sugar phosphate isomerase/epimerase Morganella morganii S4
3 group_1272 LHKJJB_09055 146082 147056 1 ycjR Sugar phosphate isomerase/epimerase Morganella morganii S3
4 group_1272 HKOGLL_08605 146082 147056 1 ycjR Sugar phosphate isomerase/epimerase Morganella morganii S5
5 group_1272 F4V73_RS13595 351704 352675 1 TIM barrel protein Morganella psychrotolerans
6 group_1272 PMI_RS17065 3755945 3756907 1 sugar phosphate isomerase/epimerase family protein Proteus mirabilis HI4320