Homologs in group_1272

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6 homologs were identified in 6 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product
FBDBKF_07520 FBDBKF_07520 25.1 Morganella morganii S1 ycjR Sugar phosphate isomerase/epimerase
EHELCC_17190 EHELCC_17190 25.1 Morganella morganii S2 ycjR Sugar phosphate isomerase/epimerase
NLDBIP_13795 NLDBIP_13795 25.1 Morganella morganii S4 ycjR Sugar phosphate isomerase/epimerase
LHKJJB_09055 LHKJJB_09055 25.1 Morganella morganii S3 ycjR Sugar phosphate isomerase/epimerase
HKOGLL_08605 HKOGLL_08605 25.1 Morganella morganii S5 ycjR Sugar phosphate isomerase/epimerase
F4V73_RS13595 F4V73_RS13595 25.4 Morganella psychrotolerans - TIM barrel protein

Distribution of the homologs in the orthogroup group_1272

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Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

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Phylogeny of the RefSeq best hits of group_1272

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism
Q6D8V4 2.87e-13 72 28 3 176 1 oiaC 3-oxo-isoapionate decarboxylase Pectobacterium atrosepticum (strain SCRI 1043 / ATCC BAA-672)
P32134 2.01e-07 55 24 6 235 4 yihM Uncharacterized protein YihM Escherichia coli (strain K12)

  • Number of RefSeq hits:

General

Source Proteus mirabilis HI4320
Locus tag PMI_RS17065
Feature type CDS
Gene -
Product sugar phosphate isomerase/epimerase family protein
Location 3755945 - 3756907 (strand: 1)
Length 963 (nucleotides) / 320 (amino acids)

Contig

Accession NC_010554
Length 4063606 nucleotides
Topology circular
Plasmid False

Orthology

Orthogroup group_1272
Orthogroup size 7
N. genomes 7

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Genomic region

Domains

PF01261 Xylose isomerase-like TIM barrel

COG entry Annotation(s)

ID Function(s) descr. Function(s) cat. Description
COG1082 Carbohydrate transport and metabolism (G) G Sugar phosphate isomerase/epimerase

Kegg Ortholog Annotation(s)

KO Description Pathways Modules
K23248 3-oxoisoapionate decarboxylase [EC:4.1.1.120] - -

Protein Sequence

MKLGIETESYHLFFQQGVMDVFDFINKATELGLDGVELNIIPDEGLHPEFGVLTSDSPEYLAKVRQAIEDKNLYCELDTRFTTPKALTKAIDIARGIGADVIRTYMFRRGQYNPKQYPKIIQDIKSIVPLLKKYRIRLAIENHEDETADEILNIVKDIDSIWVGAHCDIGNGMMAWEDPIVTVSKLAPYTYSTHFKDHIVTHDDETLVITGMPLGEGSIDIDECFRLLVEHSPVTRINLENCFPYTSHFARDKGTGGVFELSGSFEVKSPPFDTQLINPLEYYYPAKISPVALKTLMDAQERCVQVSVNKLKELRKKYCY

Flanking regions ( +/- flanking 50bp)

TATTTTCTTAATATGGCTAAATACGGGTATAGGAATTCGAGGAAGAAATTATGAAACTAGGTATTGAAACAGAGTCCTATCACCTATTTTTTCAGCAGGGTGTAATGGATGTTTTTGATTTTATAAATAAAGCAACTGAATTAGGGCTGGATGGGGTCGAATTAAATATCATTCCTGATGAAGGATTACACCCAGAATTTGGTGTGTTAACAAGTGATAGCCCTGAATATTTAGCAAAAGTACGTCAGGCAATTGAAGATAAAAATCTTTATTGTGAATTAGATACACGTTTTACAACACCAAAGGCATTAACAAAAGCAATTGATATCGCTCGAGGAATTGGTGCTGATGTGATACGTACTTATATGTTTCGTCGAGGACAATACAATCCGAAACAATACCCTAAAATTATTCAAGATATTAAGTCTATTGTTCCATTATTAAAAAAATATCGTATACGTCTTGCAATAGAAAATCATGAAGATGAAACGGCTGATGAAATCTTAAATATTGTAAAAGATATTGATTCTATTTGGGTTGGTGCACATTGTGATATTGGTAATGGCATGATGGCGTGGGAAGATCCTATAGTAACAGTGAGCAAATTAGCACCTTATACATATAGCACTCATTTTAAAGATCATATTGTTACACATGATGATGAAACACTGGTAATTACAGGAATGCCTCTTGGTGAAGGGAGTATTGATATCGATGAATGTTTTCGTTTATTAGTTGAACATTCGCCTGTAACACGTATTAACTTAGAAAACTGTTTTCCCTATACATCTCATTTTGCTAGAGATAAAGGAACGGGGGGAGTATTTGAATTAAGTGGAAGCTTTGAAGTTAAATCACCACCTTTTGATACGCAATTAATTAACCCCTTGGAATATTATTATCCAGCTAAAATTTCTCCTGTTGCATTAAAAACATTAATGGACGCACAAGAGCGTTGTGTACAAGTTTCTGTTAATAAATTAAAAGAACTAAGAAAAAAATATTGTTATTAATATATAAAAATAGTTATCAAATATTGGAGTGATCTCATGATTATTAATAC