Homologs in group_2757

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5 homologs were identified in 5 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product
FBDBKF_07520 FBDBKF_07520 100.0 Morganella morganii S1 ycjR Sugar phosphate isomerase/epimerase
EHELCC_17190 EHELCC_17190 100.0 Morganella morganii S2 ycjR Sugar phosphate isomerase/epimerase
NLDBIP_13795 NLDBIP_13795 100.0 Morganella morganii S4 ycjR Sugar phosphate isomerase/epimerase
LHKJJB_09055 LHKJJB_09055 100.0 Morganella morganii S3 ycjR Sugar phosphate isomerase/epimerase
F4V73_RS13595 F4V73_RS13595 83.6 Morganella psychrotolerans - TIM barrel protein

Distribution of the homologs in the orthogroup group_2757

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Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

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Phylogeny of the RefSeq best hits of group_2757

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism
P32134 4.67e-154 437 64 1 319 4 yihM Uncharacterized protein YihM Escherichia coli (strain K12)
Q6D8V4 3.92e-06 51 23 3 144 1 oiaC 3-oxo-isoapionate decarboxylase Pectobacterium atrosepticum (strain SCRI 1043 / ATCC BAA-672)

  • Number of RefSeq hits:

General

Source Morganella morganii S5
Locus tag HKOGLL_08605
Feature type CDS
Gene ycjR
Product Sugar phosphate isomerase/epimerase
Location 146082 - 147056 (strand: 1)
Length 975 (nucleotides) / 324 (amino acids)
In genomic island -

Contig

Accession ZDB_685
Length 192328 nucleotides
Topology linear
Plasmid False

Orthology

Orthogroup group_2757
Orthogroup size 6
N. genomes 6

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Genomic region

Domains

PF01261 Xylose isomerase-like TIM barrel

COG entry Annotation(s)

ID Function(s) descr. Function(s) cat. Description
COG1082 Carbohydrate transport and metabolism (G) G Sugar phosphate isomerase/epimerase

Protein Sequence

MNTDDARRIIERADKLPLYLHAYAYHLNMRFEKILPGDLLDIANEHHLPGVKIHVLDGETQSLSTMTDEQLEAFAEKAKRYHLDINIETSASDNKTLDDAVRIALKTGASSVRFYPRYEGALSDVLRRISADIGYLKTHYQHSGLTFVLEQHEDLKSHELVKLIKEADFPELTLLFDFGNMINACELPMEALAVMQDHITQVHIKDAVILEEGDGFGHTACRSGEGNLPFKEMLRALICLGEEKPQVISYGLEEEVDYYAPAFRFKNEGNDPWIPWRQLSETPLPENEIEERLAREKEDAVNQLIYVRNVIDEIKTEALAVIHK

Flanking regions ( +/- flanking 50bp)

TTTGAATCTGTTTATTTTTTTGTTGAGCTTTAGACACAGGAATCTGAATCATGAATACTGATGATGCCCGCCGGATTATTGAACGTGCAGATAAATTACCGTTATATCTGCATGCCTACGCCTATCATCTGAATATGCGTTTTGAAAAAATATTGCCGGGTGACTTACTGGATATCGCAAACGAACATCATTTGCCGGGCGTCAAAATACATGTACTGGATGGTGAAACACAATCTCTTTCAACCATGACAGACGAACAGCTTGAGGCTTTTGCAGAGAAAGCAAAACGTTATCATCTGGATATTAATATTGAAACCAGCGCCTCCGATAATAAAACCCTGGATGATGCGGTCAGAATCGCACTGAAAACCGGGGCAAGTTCTGTCCGTTTTTATCCGCGCTATGAAGGTGCACTGTCTGATGTGCTCCGCCGTATTTCCGCAGACATCGGTTATTTAAAAACACACTATCAGCACTCCGGTCTGACATTTGTTCTGGAACAGCATGAAGATTTAAAAAGCCACGAGCTGGTTAAGCTGATAAAAGAAGCTGATTTCCCGGAACTGACGCTGTTATTTGACTTCGGCAATATGATCAATGCCTGTGAATTACCAATGGAAGCCCTGGCAGTCATGCAGGATCATATTACTCAGGTGCATATCAAAGATGCGGTGATTCTGGAAGAAGGTGATGGTTTCGGCCATACCGCCTGCCGCTCCGGGGAAGGTAATCTGCCGTTTAAAGAGATGCTGCGGGCATTAATATGTCTGGGTGAAGAGAAACCACAGGTTATTTCCTACGGGCTGGAAGAAGAAGTGGATTATTACGCACCGGCCTTCCGTTTTAAAAATGAAGGAAATGATCCGTGGATCCCGTGGCGTCAGCTGAGTGAAACACCATTACCTGAAAATGAAATTGAAGAACGTCTCGCCCGTGAAAAAGAAGATGCCGTCAATCAGCTGATTTATGTCCGTAACGTCATTGATGAAATAAAGACAGAGGCACTCGCCGTTATTCATAAATAAAAAAATATCAGCACTACACACCATTAATTTAAAAACAACACTCAATACTG