COG1073


Help to interpret the results

Three outputs have been generated:
General: this result contains the description and frequency of the selected COG entries COG1073, of which KO pathways and KO modules it is part. Additionally, its occurence in the database is reported.
Proteins list: list of occurences of the COG entries within the database. 3 occurences are identified. The table reports the orthogroup, the organism in which each occurrence has been found, and the locus tag enriched by start and stop position, strand, gene name and product.
Clicking on the Ortohgroup name or locus you will be redirected to further info.
Profiles: Phylogenetic tree annotated with
- the presence of the COG entry(ies) of interest within all the genomes of the database (first column)
- the size of the orthogroup(s) in which the reported COG entries has been clustered.
In red the COG entries with positive hit(s) in the corresponding genome.
In green the discrepencies between orthogroup clustering and COG entries prediction. Green homologs (same orthogroup) are not positive hit(s) for the considered COG entries.

Variations within orthogroups may be due to the clustering of multi domain proteins or because of erroneous homolog clustering or COG entries prediction.

Description

Description Fermentation-respiration switch esterase FrsA, DUF1100 family
Function(s) descr. Signal transduction mechanisms (T)

Occurence in the database

COG1073 is associated with 3 different proteins (see tab "Protein list" and "Profile")
The 3 proteins are classified into 2 different orthogroup(s)
# Orthogroup Locus Start Stop S. Gene Product Organism
0 group_3724 F4V73_RS03275 698708 699613 1 alpha/beta hydrolase Morganella psychrotolerans
1 group_3724 F4V73_RS05510 1171715 1172743 -1 alpha/beta hydrolase Morganella psychrotolerans
2 group_3133 PMI_RS10070 2185086 2198945 1 rtxA MARTX multifunctional-autoprocessing repeats-in-toxin holotoxin RtxA Proteus mirabilis HI4320