Orthogroup:group_3719


Homologs in group_3719

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3 homologs were identified in 1 genome with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Source Gene Product
F4V73_RS00070 F4V73_RS00070 Morganella psychrotolerans tssG type VI secretion system baseplate subunit TssG
F4V73_RS09400 F4V73_RS09400 Morganella psychrotolerans tssG type VI secretion system baseplate subunit TssG
F4V73_RS16740 F4V73_RS16740 Morganella psychrotolerans tssG type VI secretion system baseplate subunit TssG

Distribution of group_3719 homologs

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Number of homologs in each genome (first column and blue bar chart)

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Phylogeny of group_3719 (midpoint rooted)


Phylogeny of the RefSeq best hits of group_3719

Orthogroup content: 3 members

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This page summarizes the annotation of all members of the orthologous group group_3719.
Gene name(s), gene product(s), a summary of protein lenght, and annotations (when available) are provided. Additionally, the number of times (occurence) an annotation is observed in the orthogroup is reported for each annotation.

Orthologs were identified with OrthoFinder. The annotation of orthologous proteins can differ depending the approach used to annotate the source genomes. Automated annotations are also subject to errors. Spurious clustering of non-orthologous proteins can also happen. This page allows to check for eventual inconsistencies.

Gene

# Gene name Occurence
1 tssG 3

Product

# Product Occurence
1 type VI secretion system baseplate subunit TssG 3

COG entry Annotation(s)

ID Occurences Function(s) cat. Function(s) descr. Description
COG3520 3 U Intracellular trafficking, secretion, and vesicular transport (U) Predicted component of the type VI protein secretion system

Kegg Ortholog Annotation(s)

KO Occurences Description Pathways Modules
K11895 3 type VI secretion system protein ImpH Biofilm formation - Pseudomonas aeruginosa -

Pfam domain Annotation(s)

Domain ID Occurences Description
PF06996 3 Type VI secretion, TssG

Virulence factor Annotation(s)

VF gene ID Occurences Protein VF ID Category
VFG041207 1 type VI secretion system baseplate subunit TssG VF1263 Effector delivery system

Protein length

Min length 324
Max length 366
Mean length (sd) 342.7 (21.4)
Median length 338.0

Protein length distribution