Orthogroup:group_293


Homologs in group_293

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8 homologs were identified in 7 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Source Gene Product
FBDBKF_07305 FBDBKF_07305 Morganella morganii S1 pqiA membrane integrity-associated transporter subunit PqiA
EHELCC_03665 EHELCC_03665 Morganella morganii S2 pqiA membrane integrity-associated transporter subunit PqiA
NLDBIP_03665 NLDBIP_03665 Morganella morganii S4 pqiA membrane integrity-associated transporter subunit PqiA
LHKJJB_09495 LHKJJB_09495 Morganella morganii S3 pqiA membrane integrity-associated transporter subunit PqiA
HKOGLL_09480 HKOGLL_09480 Morganella morganii S5 pqiA membrane integrity-associated transporter subunit PqiA
F4V73_RS01490 F4V73_RS01490 Morganella psychrotolerans pqiA membrane integrity-associated transporter subunit PqiA
PMI_RS03815 PMI_RS03815 Proteus mirabilis HI4320 pqiA membrane integrity-associated transporter subunit PqiA
PMI_RS04920 PMI_RS04920 Proteus mirabilis HI4320 - membrane integrity lipid transport subunit YebS

Distribution of group_293 homologs

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Number of homologs in each genome (first column and blue bar chart)

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Phylogeny of group_293 (midpoint rooted)


Phylogeny of the RefSeq best hits of group_293

Orthogroup content: 8 members

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This page summarizes the annotation of all members of the orthologous group group_293.
Gene name(s), gene product(s), a summary of protein lenght, and annotations (when available) are provided. Additionally, the number of times (occurence) an annotation is observed in the orthogroup is reported for each annotation.

Orthologs were identified with OrthoFinder. The annotation of orthologous proteins can differ depending the approach used to annotate the source genomes. Automated annotations are also subject to errors. Spurious clustering of non-orthologous proteins can also happen. This page allows to check for eventual inconsistencies.

Gene

# Gene name Occurence
1 pqiA 7
2 - 1

Product

# Product Occurence
1 membrane integrity-associated transporter subunit PqiA 7
2 membrane integrity lipid transport subunit YebS 1

COG entry Annotation(s)

ID Occurences Function(s) cat. Function(s) descr. Description
COG2995 8 M Cell wall/membrane/envelope biogenesis (M) Intermembrane transporter PqiABC subunit PqiA

Kegg Ortholog Annotation(s)

KO Occurences Description Pathways Modules
K03808 8 paraquat-inducible protein A - -

Pfam domain Annotation(s)

Domain ID Occurences Description
PF04403 8 Paraquat-inducible protein A

Annotations of the 6 SwissProt hits

Annotation Number of occurrences
Intermembrane transport protein PqiA 3
Intermembrane transport protein YebS 2
Uncharacterized protein HI_1671 1

Protein length

Min length 418
Max length 434
Mean length (sd) 425.5 (4.3)
Median length 425.0

Protein length distribution