Homologs in group_3636

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4 homologs were identified in 4 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product
FBDBKF_20620 FBDBKF_20620 100.0 Morganella morganii S1 - hypothetical protein
EHELCC_04305 EHELCC_04305 100.0 Morganella morganii S2 - DEAD/DEAH box helicase family protein
LHKJJB_10135 LHKJJB_10135 100.0 Morganella morganii S3 - DEAD/DEAH box helicase family protein
HKOGLL_08840 HKOGLL_08840 100.0 Morganella morganii S5 - DEAD/DEAH box helicase family protein

Distribution of the homologs in the orthogroup group_3636

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Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

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Phylogeny of the RefSeq best hits of group_3636

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism
Q971U1 4.02e-08 60 23 12 400 1 xpb1 DNA 3'-5' helicase/translocase StoXPB1 Sulfurisphaera tokodaii (strain DSM 16993 / JCM 10545 / NBRC 100140 / 7)
Q914K8 6.78e-06 53 22 6 237 4 SIFV0022 Putative helicase 22 Sulfolobus islandicus filamentous virus (isolate Iceland/Hveragerdi)
P24125 7.1e-06 53 23 7 216 4 None 51.5 kDa protein Lactococcus phage (isolate 7-9)
Q0TXZ2 4.89e-05 50 24 12 292 3 SUB2 ATP-dependent RNA helicase SUB2 Phaeosphaeria nodorum (strain SN15 / ATCC MYA-4574 / FGSC 10173)
A1CMQ7 6.05e-05 50 23 12 317 3 sub2 ATP-dependent RNA helicase sub2 Aspergillus clavatus (strain ATCC 1007 / CBS 513.65 / DSM 816 / NCTC 3887 / NRRL 1 / QM 1276 / 107)
A5E3W5 6.17e-05 50 24 15 348 3 SUB2 ATP-dependent RNA helicase SUB2 Lodderomyces elongisporus (strain ATCC 11503 / CBS 2605 / JCM 1781 / NBRC 1676 / NRRL YB-4239)
Q2U6P7 6.89e-05 50 23 12 317 3 sub2 ATP-dependent RNA helicase sub2 Aspergillus oryzae (strain ATCC 42149 / RIB 40)
Q0CGJ9 9.52e-05 49 23 13 318 3 sub2 ATP-dependent RNA helicase sub2 Aspergillus terreus (strain NIH 2624 / FGSC A1156)
A7TJM9 0.000131 49 21 17 459 3 DRS1 ATP-dependent RNA helicase DRS1 Vanderwaltozyma polyspora (strain ATCC 22028 / DSM 70294 / BCRC 21397 / CBS 2163 / NBRC 10782 / NRRL Y-8283 / UCD 57-17)
A2R0B5 0.000178 48 23 12 316 3 sub2 ATP-dependent RNA helicase sub2 Aspergillus niger (strain ATCC MYA-4892 / CBS 513.88 / FGSC A1513)
Q759L6 0.000354 48 25 12 268 3 SUB2 ATP-dependent RNA helicase SUB2 Eremothecium gossypii (strain ATCC 10895 / CBS 109.51 / FGSC 9923 / NRRL Y-1056)
A6R603 0.000395 47 24 12 316 3 SUB2 ATP-dependent RNA helicase SUB2 Ajellomyces capsulatus (strain NAm1 / WU24)
A1DL85 0.000419 47 23 12 317 3 sub2 ATP-dependent RNA helicase sub2 Neosartorya fischeri (strain ATCC 1020 / DSM 3700 / CBS 544.65 / FGSC A1164 / JCM 1740 / NRRL 181 / WB 181)
A7TJT7 0.000563 47 25 11 269 3 SUB2-2 ATP-dependent RNA helicase SUB2-2 Vanderwaltozyma polyspora (strain ATCC 22028 / DSM 70294 / BCRC 21397 / CBS 2163 / NBRC 10782 / NRRL Y-8283 / UCD 57-17)
Q17YL7 0.000591 47 23 7 215 3 uvrB UvrABC system protein B Helicobacter acinonychis (strain Sheeba)
Q4WCW2 0.000653 47 22 11 324 3 sub2 ATP-dependent RNA helicase sub2 Aspergillus fumigatus (strain ATCC MYA-4609 / CBS 101355 / FGSC A1100 / Af293)
Q1CSF2 0.000847 47 24 7 215 3 uvrB UvrABC system protein B Helicobacter pylori (strain HPAG1)
Q5ASK8 0.001 46 24 13 314 3 sub2 ATP-dependent RNA helicase sub2 Emericella nidulans (strain FGSC A4 / ATCC 38163 / CBS 112.46 / NRRL 194 / M139)

  • Number of RefSeq hits:

General

Source Morganella morganii S4
Locus tag NLDBIP_04305
Feature type CDS
Gene -
Product DEAD/DEAH box helicase family protein
Location 187949 - 190930 (strand: 1)
Length 2982 (nucleotides) / 993 (amino acids)
In genomic island GI12

Contig

Accession ZDB_520
Length 336657 nucleotides
Topology linear
Plasmid False

Orthology

Orthogroup group_3636
Orthogroup size 5
N. genomes 5

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Genomic region

Domains

PF00271 Helicase conserved C-terminal domain
PF04851 Type III restriction enzyme, res subunit

COG entry Annotation(s)

ID Function(s) descr. Function(s) cat. Description
COG1061 Transcription (K)
Replication, recombination and repair (L)		 KL Superfamily II DNA or RNA helicase

Protein Sequence

MKEQTIQLDKGEITYLPINELSKNSSCNDIHLSWLKNNFSYLEKNKHQNGLRPPQIGALFSALGYLKTNSNEAATIVMPTGTGKTETMLSLVVAGHFKKTLVIVPSDALRQQTKSKFVNLGYIRTFKLVPDDMLNPRVMIINGAARTKQDIELLQTANIIITTVASLNLFYKDPLQFLINNCTHLIVDEAHHIEADKWSKIKSYFSDKPVFQFTATPFRSDGKRVDGRVIFEYPIEQAQKDGYFKAIEFYPIREFDESKSDLAIANKAINLLKKDLNNNLDHILMVRVSSTKRADEVFKIYEKHKNLNPIVVHTKVPNYKNIIADIKAKKHKIIVCVNMLGEGFDLPELKIAAIHDTHKGINITLQFTGRFTRQRDDLGNAKFVANIAEQRVNEAIESLYKEDSDWNKIIRTIGEIKISEVIESQKFKDEFDYTKTKLLDLGLSPKVSTVIYKTKTPKWEPENFIKIINKSNHLVDKVINKEETILIFSLKTYNKVNWSFSEDLMDIIWELYIVYFDKDKKLLYIHSSGQDTNISRLAKFITEDPTLISGDKIFRTMYGIKRMKLQNVGLNKASKNLRFMMYTGSDTKEAIPELITRRAIKSNIFSKGFEKGVPVTLGCSHKGKIWSMSSDSVHNWINWCDHIGKKILDDNIDTNDILKTAMQSETITKFPSNLIGLSIDWPVELIRKSHYSSVYLIIDGIEYSIHDCELQLISERFFGTDITFNLNIDNLSYPIKFSLSDHYKFKSQYNITLQLNNKNSQNLCDYFDDHPPSIFLSDTSMIEGNQRFYCEENYQIPIDINKFEGWEWEEINLAKESQRDERRKDSIQYYTIQKIFSDYDIIFDDDGAGESADIIAFKVIDEMTVVIDFFHCKYCPENKQPSSRVDDVYQVSGQAMKGIKWINDLDELYTHLKHRENLKIKQEKPSRFDKGTMKDLSLFFKRAALSKVRTSFFIVQPAISINKLTEDVKCILGAAEIYIKETTGSSLKIITSN

Flanking regions ( +/- flanking 50bp)

AATAAAAAAATAATTTAAACATTAATTCTTAATTTTATAACGAGGTATTAATGAAAGAACAAACTATACAGTTAGATAAAGGTGAAATAACATATTTACCTATAAATGAATTATCCAAAAATTCGTCTTGTAATGATATTCATCTTAGCTGGTTAAAAAACAACTTTAGCTATCTGGAAAAAAACAAACATCAAAATGGCCTTAGACCACCGCAAATCGGCGCTTTATTTTCAGCCCTAGGTTATTTAAAAACCAATTCAAATGAAGCAGCAACAATTGTAATGCCAACTGGAACAGGTAAAACAGAAACCATGTTATCATTAGTAGTTGCGGGGCATTTCAAAAAAACATTGGTAATAGTACCATCTGATGCTTTACGACAACAAACTAAAAGCAAGTTTGTAAATCTAGGCTATATCCGAACTTTTAAATTAGTGCCTGATGATATGCTTAATCCTCGGGTAATGATTATAAATGGTGCTGCAAGAACTAAACAGGATATTGAGTTACTACAAACTGCTAATATCATTATTACAACAGTCGCATCTCTTAATTTATTTTATAAAGACCCGCTACAATTTTTAATCAATAACTGTACTCATCTTATTGTAGATGAAGCCCACCATATTGAAGCAGATAAATGGTCGAAAATTAAATCATATTTTTCTGATAAACCTGTTTTTCAATTTACAGCAACTCCATTTAGAAGCGATGGAAAAAGAGTTGATGGTAGAGTTATATTTGAATACCCCATAGAGCAAGCACAAAAAGATGGATATTTTAAAGCGATAGAATTTTATCCTATAAGGGAGTTTGATGAAAGTAAATCAGACTTAGCAATAGCTAATAAAGCTATAAATTTATTAAAAAAAGATTTAAATAATAATTTAGATCATATATTGATGGTTAGAGTTAGTTCAACTAAAAGAGCAGATGAAGTATTCAAAATATATGAAAAACACAAAAATTTAAATCCGATTGTAGTACATACAAAAGTACCTAACTACAAAAATATAATAGCTGATATAAAAGCAAAAAAACATAAAATTATTGTATGTGTTAATATGTTAGGAGAAGGTTTTGATCTTCCTGAATTAAAGATAGCTGCAATACATGATACTCATAAAGGTATTAATATCACCCTACAATTTACAGGTCGATTTACACGACAAAGAGATGATTTAGGTAATGCTAAGTTCGTTGCAAATATAGCAGAGCAGAGAGTCAACGAAGCTATTGAATCTTTATACAAAGAAGACTCTGACTGGAATAAAATAATTAGGACTATTGGTGAAATAAAAATATCAGAAGTAATTGAAAGTCAAAAATTTAAAGATGAATTTGATTATACAAAAACAAAATTGCTAGATTTAGGTTTAAGTCCAAAAGTAAGTACAGTTATATACAAGACAAAAACTCCAAAGTGGGAACCTGAAAATTTTATAAAAATAATAAATAAATCTAACCACCTTGTAGATAAAGTAATTAACAAAGAAGAAACAATATTAATTTTCTCATTAAAAACATACAATAAAGTTAATTGGAGTTTTTCTGAGGATTTAATGGATATCATTTGGGAATTATATATTGTTTATTTTGATAAAGATAAAAAATTACTTTATATTCATTCTTCAGGCCAAGATACTAATATCTCTAGACTTGCAAAATTTATTACCGAAGATCCTACATTAATATCAGGCGATAAAATATTTAGGACTATGTATGGAATAAAAAGAATGAAGTTACAAAATGTTGGGCTTAATAAAGCGAGTAAAAATTTAAGATTTATGATGTATACTGGTTCAGATACAAAAGAAGCCATACCTGAGCTAATAACTAGAAGAGCCATAAAATCCAATATTTTTTCAAAAGGATTTGAAAAAGGAGTTCCAGTAACTTTAGGTTGTTCACATAAAGGGAAAATCTGGTCTATGAGCTCAGATTCAGTTCATAATTGGATAAACTGGTGCGATCATATAGGAAAAAAAATACTTGATGATAATATTGATACTAATGACATTTTAAAAACAGCAATGCAATCTGAAACTATTACAAAATTTCCATCAAATTTAATAGGTTTAAGCATAGATTGGCCAGTCGAATTAATTAGAAAATCTCATTACAGTAGTGTTTATTTAATAATTGATGGTATTGAATATAGTATTCATGATTGTGAACTTCAATTAATATCAGAACGTTTTTTCGGTACAGATATAACATTCAACCTCAATATAGATAATTTATCCTACCCTATAAAATTTTCATTGTCAGATCATTATAAATTCAAATCACAATATAATATAACGCTACAATTAAATAATAAAAACTCTCAAAATTTATGTGACTACTTTGATGATCATCCACCTTCTATATTTCTTTCTGATACTTCAATGATTGAAGGAAATCAACGATTTTATTGTGAAGAAAACTATCAAATACCAATTGATATTAATAAGTTTGAAGGCTGGGAATGGGAAGAAATTAATTTAGCCAAAGAATCACAGCGTGATGAGCGTAGAAAAGACTCGATTCAATATTACACTATTCAGAAGATATTCTCAGACTATGATATTATATTTGATGATGATGGAGCCGGCGAATCAGCTGATATTATTGCGTTTAAAGTCATTGATGAAATGACTGTTGTGATTGATTTCTTTCATTGTAAATATTGCCCTGAAAATAAACAACCATCTTCTAGGGTAGATGATGTTTATCAAGTATCTGGTCAAGCCATGAAAGGAATTAAATGGATTAACGATTTAGATGAACTTTACACTCATTTAAAACATAGAGAAAATTTAAAAATAAAACAAGAAAAACCATCAAGATTTGATAAAGGTACAATGAAAGATTTAAGTTTATTTTTTAAACGAGCTGCGTTGTCAAAAGTTAGGACAAGTTTTTTTATAGTCCAGCCAGCTATTTCCATCAATAAACTAACAGAAGATGTTAAATGTATTTTAGGTGCGGCTGAAATCTATATAAAAGAAACAACTGGCTCTTCATTAAAAATTATAACTAGTAACTAGTTAATATAAATTTTGGTATAAAAAGTTCATTTTTTAGTTATAAAAATGAA