COG0652


Help to interpret the results

Three outputs have been generated:
General: this result contains the description and frequency of the selected COG entries COG0652, of which KO pathways and KO modules it is part. Additionally, its occurence in the database is reported.
Proteins list: list of occurences of the COG entries within the database. 14 occurences are identified. The table reports the orthogroup, the organism in which each occurrence has been found, and the locus tag enriched by start and stop position, strand, gene name and product.
Clicking on the Ortohgroup name or locus you will be redirected to further info.
Profiles: Phylogenetic tree annotated with
- the presence of the COG entry(ies) of interest within all the genomes of the database (first column)
- the size of the orthogroup(s) in which the reported COG entries has been clustered.
In red the COG entries with positive hit(s) in the corresponding genome.
In green the discrepencies between orthogroup clustering and COG entries prediction. Green homologs (same orthogroup) are not positive hit(s) for the considered COG entries.

Variations within orthogroups may be due to the clustering of multi domain proteins or because of erroneous homolog clustering or COG entries prediction.

Description

Description Peptidyl-prolyl cis-trans isomerase (rotamase) - cyclophilin family
Function(s) descr. Posttranslational modification, protein turnover, chaperones (O)

Occurence in the database

COG0652 is associated with 14 different proteins (see tab "Protein list" and "Profile")
The 14 proteins are classified into 2 different orthogroup(s)
# Orthogroup Locus Start Stop S. Gene Product Organism
0 group_916 FBDBKF_04955 196977 197471 1 ppiB peptidylprolyl isomerase B Morganella morganii S1
1 group_1701 FBDBKF_11860 22427 22993 -1 ppiA peptidylprolyl isomerase A Morganella morganii S1
2 group_916 EHELCC_06245 256434 256928 1 ppiB peptidylprolyl isomerase B Morganella morganii S2
3 group_1701 EHELCC_14445 111712 112278 1 ppiA peptidylprolyl isomerase A Morganella morganii S2
4 group_916 NLDBIP_06565 297499 297993 1 ppiB peptidylprolyl isomerase B Morganella morganii S4
5 group_1701 NLDBIP_15540 115649 116215 1 ppiA peptidylprolyl isomerase A Morganella morganii S4
6 group_916 LHKJJB_03445 275023 275517 1 ppiB peptidylprolyl isomerase B Morganella morganii S3
7 group_1701 LHKJJB_15070 22427 22993 -1 ppiA peptidylprolyl isomerase A Morganella morganii S3
8 group_916 HKOGLL_06920 196887 197381 1 ppiB peptidylprolyl isomerase B Morganella morganii S5
9 group_1701 HKOGLL_14190 9090 9656 -1 ppiA peptidylprolyl isomerase A Morganella morganii S5
10 group_1701 F4V73_RS14790 194546 195112 1 ppiA peptidylprolyl isomerase A Morganella psychrotolerans
11 group_916 F4V73_RS16095 22040 22534 1 ppiB peptidylprolyl isomerase B Morganella psychrotolerans
12 group_916 PMI_RS10640 2340288 2340782 1 ppiB peptidylprolyl isomerase B Proteus mirabilis HI4320
13 group_1701 PMI_RS13945 3096808 3097380 -1 ppiA peptidylprolyl isomerase A Proteus mirabilis HI4320