COG0624
Help to interpret the results
Three outputs have been generated:
General: this result contains the description and frequency of the selected COG entries COG0624, of which KO pathways and KO modules it is part. Additionally, its occurence in the database is reported.
Proteins list: list of occurences of the COG entries
within the database. 27 occurences are identified.
The table reports the orthogroup, the organism in which each occurrence has been found, and the locus tag enriched by start and stop position, strand, gene name and product.
Clicking on the Ortohgroup name or locus you will be redirected to further info.
Profiles: Phylogenetic tree annotated with
- the presence of the COG entry(ies) of interest within all the genomes of the database (first column)
- the size of the orthogroup(s) in which the reported COG entries has been clustered.
In red the COG entries with positive hit(s) in the corresponding genome.
In green the discrepencies between orthogroup clustering and COG entries prediction.
Green homologs (same orthogroup) are not positive hit(s) for the considered COG entries.
Variations within orthogroups may be due to the clustering of multi domain proteins or because of erroneous homolog clustering or COG entries prediction.
Description
Description |
Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase or related deacylase |
Function(s) descr. |
Amino acid transport and metabolism (E) |
Occurence in the database
COG0624 is associated with 27 different proteins (see tab "Protein list" and "Profile") |
The 27 proteins are classified into 5 different orthogroup(s)
|
# |
Orthogroup |
Locus |
Start |
Stop |
S. |
Gene |
Product |
Organism |
0 |
group_2764 |
FBDBKF_07760 |
71765 |
72982 |
-1 |
ygeY |
YgeY family selenium metabolism-linked hydrolase |
Morganella morganii S1 |
1 |
group_1747 |
FBDBKF_12175 |
91449 |
92609 |
1 |
argE |
acetylornithine deacetylase |
Morganella morganii S1 |
2 |
group_1826 |
FBDBKF_13525 |
82501 |
83631 |
1 |
dapE |
succinyl-diaminopimelate desuccinylase |
Morganella morganii S1 |
3 |
group_3032 |
FBDBKF_18080 |
16395 |
17654 |
1 |
argE |
Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase or related deacylase |
Morganella morganii S1 |
4 |
group_1826 |
EHELCC_08570 |
191560 |
192690 |
-1 |
dapE |
succinyl-diaminopimelate desuccinylase |
Morganella morganii S2 |
5 |
group_2764 |
EHELCC_13590 |
45959 |
47176 |
-1 |
ygeY |
YgeY family selenium metabolism-linked hydrolase |
Morganella morganii S2 |
6 |
group_1747 |
EHELCC_14130 |
42096 |
43256 |
-1 |
argE |
acetylornithine deacetylase |
Morganella morganii S2 |
7 |
group_3032 |
EHELCC_16780 |
16395 |
17654 |
1 |
argE |
Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase or related deacylase |
Morganella morganii S2 |
8 |
group_1826 |
NLDBIP_08895 |
191560 |
192690 |
-1 |
dapE |
succinyl-diaminopimelate desuccinylase |
Morganella morganii S4 |
9 |
group_2764 |
NLDBIP_14035 |
66834 |
68051 |
-1 |
ygeY |
YgeY family selenium metabolism-linked hydrolase |
Morganella morganii S4 |
10 |
group_1747 |
NLDBIP_15225 |
46033 |
47193 |
-1 |
argE |
acetylornithine deacetylase |
Morganella morganii S4 |
11 |
group_3032 |
NLDBIP_17670 |
38112 |
39371 |
-1 |
argE |
Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase or related deacylase |
Morganella morganii S4 |
12 |
group_1826 |
LHKJJB_05370 |
64469 |
65599 |
1 |
dapE |
succinyl-diaminopimelate desuccinylase |
Morganella morganii S3 |
13 |
group_2764 |
LHKJJB_08815 |
91698 |
92915 |
1 |
ygeY |
YgeY family selenium metabolism-linked hydrolase |
Morganella morganii S3 |
14 |
group_1747 |
LHKJJB_15385 |
91449 |
92609 |
1 |
argE |
acetylornithine deacetylase |
Morganella morganii S3 |
15 |
group_3032 |
LHKJJB_17590 |
38112 |
39371 |
-1 |
argE |
Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase or related deacylase |
Morganella morganii S3 |
16 |
group_1826 |
HKOGLL_05545 |
176151 |
177281 |
-1 |
dapE |
succinyl-diaminopimelate desuccinylase |
Morganella morganii S5 |
17 |
group_2764 |
HKOGLL_08365 |
91698 |
92915 |
1 |
ygeY |
YgeY family selenium metabolism-linked hydrolase |
Morganella morganii S5 |
18 |
group_1747 |
HKOGLL_14505 |
78112 |
79272 |
1 |
argE |
acetylornithine deacetylase |
Morganella morganii S5 |
19 |
group_3032 |
HKOGLL_17405 |
38112 |
39371 |
-1 |
argE |
Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase or related deacylase |
Morganella morganii S5 |
20 |
group_1826 |
F4V73_RS03235 |
690219 |
691349 |
-1 |
dapE |
succinyl-diaminopimelate desuccinylase |
Morganella psychrotolerans |
21 |
group_2764 |
F4V73_RS13285 |
285124 |
286341 |
1 |
|
YgeY family selenium metabolism-linked hydrolase |
Morganella psychrotolerans |
22 |
group_1747 |
F4V73_RS16985 |
19149 |
20309 |
1 |
argE |
acetylornithine deacetylase |
Morganella psychrotolerans |
23 |
group_3032 |
PMI_RS01385 |
341514 |
342770 |
-1 |
|
Zn-dependent hydrolase |
Proteus mirabilis HI4320 |
24 |
group_1826 |
PMI_RS07575 |
1654004 |
1655134 |
1 |
dapE |
succinyl-diaminopimelate desuccinylase |
Proteus mirabilis HI4320 |
25 |
group_194 |
PMI_RS15245 |
3382289 |
3383422 |
1 |
|
M20 family metallopeptidase |
Proteus mirabilis HI4320 |
26 |
group_1747 |
PMI_RS16000 |
3555684 |
3556847 |
-1 |
argE |
acetylornithine deacetylase |
Proteus mirabilis HI4320 |