COG0624


Help to interpret the results

Three outputs have been generated:
General: this result contains the description and frequency of the selected COG entries COG0624, of which KO pathways and KO modules it is part. Additionally, its occurence in the database is reported.
Proteins list: list of occurences of the COG entries within the database. 27 occurences are identified. The table reports the orthogroup, the organism in which each occurrence has been found, and the locus tag enriched by start and stop position, strand, gene name and product.
Clicking on the Ortohgroup name or locus you will be redirected to further info.
Profiles: Phylogenetic tree annotated with
- the presence of the COG entry(ies) of interest within all the genomes of the database (first column)
- the size of the orthogroup(s) in which the reported COG entries has been clustered.
In red the COG entries with positive hit(s) in the corresponding genome.
In green the discrepencies between orthogroup clustering and COG entries prediction. Green homologs (same orthogroup) are not positive hit(s) for the considered COG entries.

Variations within orthogroups may be due to the clustering of multi domain proteins or because of erroneous homolog clustering or COG entries prediction.

Description

Description Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase or related deacylase
Function(s) descr. Amino acid transport and metabolism (E)

Occurence in the database

COG0624 is associated with 27 different proteins (see tab "Protein list" and "Profile")
The 27 proteins are classified into 5 different orthogroup(s)
# Orthogroup Locus Start Stop S. Gene Product Organism
0 group_2764 FBDBKF_07760 71765 72982 -1 ygeY YgeY family selenium metabolism-linked hydrolase Morganella morganii S1
1 group_1747 FBDBKF_12175 91449 92609 1 argE acetylornithine deacetylase Morganella morganii S1
2 group_1826 FBDBKF_13525 82501 83631 1 dapE succinyl-diaminopimelate desuccinylase Morganella morganii S1
3 group_3032 FBDBKF_18080 16395 17654 1 argE Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase or related deacylase Morganella morganii S1
4 group_1826 EHELCC_08570 191560 192690 -1 dapE succinyl-diaminopimelate desuccinylase Morganella morganii S2
5 group_2764 EHELCC_13590 45959 47176 -1 ygeY YgeY family selenium metabolism-linked hydrolase Morganella morganii S2
6 group_1747 EHELCC_14130 42096 43256 -1 argE acetylornithine deacetylase Morganella morganii S2
7 group_3032 EHELCC_16780 16395 17654 1 argE Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase or related deacylase Morganella morganii S2
8 group_1826 NLDBIP_08895 191560 192690 -1 dapE succinyl-diaminopimelate desuccinylase Morganella morganii S4
9 group_2764 NLDBIP_14035 66834 68051 -1 ygeY YgeY family selenium metabolism-linked hydrolase Morganella morganii S4
10 group_1747 NLDBIP_15225 46033 47193 -1 argE acetylornithine deacetylase Morganella morganii S4
11 group_3032 NLDBIP_17670 38112 39371 -1 argE Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase or related deacylase Morganella morganii S4
12 group_1826 LHKJJB_05370 64469 65599 1 dapE succinyl-diaminopimelate desuccinylase Morganella morganii S3
13 group_2764 LHKJJB_08815 91698 92915 1 ygeY YgeY family selenium metabolism-linked hydrolase Morganella morganii S3
14 group_1747 LHKJJB_15385 91449 92609 1 argE acetylornithine deacetylase Morganella morganii S3
15 group_3032 LHKJJB_17590 38112 39371 -1 argE Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase or related deacylase Morganella morganii S3
16 group_1826 HKOGLL_05545 176151 177281 -1 dapE succinyl-diaminopimelate desuccinylase Morganella morganii S5
17 group_2764 HKOGLL_08365 91698 92915 1 ygeY YgeY family selenium metabolism-linked hydrolase Morganella morganii S5
18 group_1747 HKOGLL_14505 78112 79272 1 argE acetylornithine deacetylase Morganella morganii S5
19 group_3032 HKOGLL_17405 38112 39371 -1 argE Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase or related deacylase Morganella morganii S5
20 group_1826 F4V73_RS03235 690219 691349 -1 dapE succinyl-diaminopimelate desuccinylase Morganella psychrotolerans
21 group_2764 F4V73_RS13285 285124 286341 1 YgeY family selenium metabolism-linked hydrolase Morganella psychrotolerans
22 group_1747 F4V73_RS16985 19149 20309 1 argE acetylornithine deacetylase Morganella psychrotolerans
23 group_3032 PMI_RS01385 341514 342770 -1 Zn-dependent hydrolase Proteus mirabilis HI4320
24 group_1826 PMI_RS07575 1654004 1655134 1 dapE succinyl-diaminopimelate desuccinylase Proteus mirabilis HI4320
25 group_194 PMI_RS15245 3382289 3383422 1 M20 family metallopeptidase Proteus mirabilis HI4320
26 group_1747 PMI_RS16000 3555684 3556847 -1 argE acetylornithine deacetylase Proteus mirabilis HI4320