Homologs in group_3032

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5 homologs were identified in 5 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product
FBDBKF_18080 FBDBKF_18080 31.5 Morganella morganii S1 argE Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase or related deacylase
EHELCC_16780 EHELCC_16780 31.5 Morganella morganii S2 argE Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase or related deacylase
NLDBIP_17670 NLDBIP_17670 31.5 Morganella morganii S4 argE Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase or related deacylase
LHKJJB_17590 LHKJJB_17590 31.5 Morganella morganii S3 argE Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase or related deacylase
HKOGLL_17405 HKOGLL_17405 31.5 Morganella morganii S5 argE Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase or related deacylase

Distribution of the homologs in the orthogroup group_3032

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Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

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Phylogeny of the RefSeq best hits of group_3032

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism
Q57051 4.94e-99 304 40 3 405 1 HI_0588 Uncharacterized hydrolase HI_0588 Haemophilus influenzae (strain ATCC 51907 / DSM 11121 / KW20 / Rd)
Q2QMN7 2.21e-76 248 36 4 391 1 UAH Ureidoglycolate hydrolase Oryza sativa subsp. japonica
P77425 3.04e-71 233 35 4 391 1 allC Allantoate amidohydrolase Escherichia coli (strain K12)
Q53389 5.7e-71 232 35 4 405 1 amaB N-carbamoyl-L-amino acid hydrolase Geobacillus stearothermophilus
Q8VXY9 3.73e-70 232 34 6 402 1 UAH Ureidoglycolate hydrolase Arabidopsis thaliana
P37113 3.38e-69 227 34 4 405 1 amaB N-carbamoyl-L-amino acid hydrolase Geobacillus stearothermophilus
Q01264 4.39e-69 227 33 3 386 1 hyuC N-carbamoyl-L-amino-acid hydrolase Pseudomonas sp. (strain NS671)
Q9F464 1.32e-68 226 32 2 398 1 hyuC N-carbamoyl-L-amino-acid hydrolase Paenarthrobacter aurescens
O32149 7.9e-64 213 34 5 406 2 pucF Allantoate amidohydrolase Bacillus subtilis (strain 168)
Q6DTN4 1.27e-56 194 32 3 378 1 hyuC N-carbamoyl-L-amino-acid hydrolase Rhizobium meliloti
Q655X8 2.06e-54 191 31 7 422 1 AAH Probable allantoate deiminase Oryza sativa subsp. japonica
O49434 7.19e-48 174 32 7 391 1 AAH Allantoate deiminase Arabidopsis thaliana
I1L153 1.08e-47 172 31 8 395 1 AAH2 Allantoate deiminase 2 Glycine max
C0M0V4 1.94e-47 172 31 9 395 1 AAH1 Allantoate deiminase 1 Glycine max
A0QZE3 8.39e-47 169 29 7 437 1 MSMEG_3995 Putative hydrolase MSMEG_3995/MSMEI_3903 Mycolicibacterium smegmatis (strain ATCC 700084 / mc(2)155)

  • Number of RefSeq hits:

General

Source Proteus mirabilis HI4320
Locus tag PMI_RS01385
Feature type CDS
Gene -
Product Zn-dependent hydrolase
Location 341514 - 342770 (strand: -1)
Length 1257 (nucleotides) / 418 (amino acids)

Contig

Accession NC_010554
Length 4063606 nucleotides
Topology circular
Plasmid False

Orthology

Orthogroup group_3032
Orthogroup size 6
N. genomes 6

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Genomic region

Domains

PF01546 Peptidase family M20/M25/M40
PF07687 Peptidase dimerisation domain

COG entry Annotation(s)

ID Function(s) descr. Function(s) cat. Description
COG0624 Amino acid transport and metabolism (E) E Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase or related deacylase

Protein Sequence

MTQPITATDFSINDMKTLIETMQIYKKDNHDKGITRIAYSEEDEAAHLYLASVMKEAGLEVYRDGIGTLYARLPGQDRTLPAVGTGSHLDTVPQGGAYDGALGVIAGFYALMQYKPQQLKRDLELIVFRAEESSRFGFSCIGSKVLTGKIDRTRWEQNRDDEGNNFFDVLKSLGYQHENLDQCLLKSDRYSAFVELHIEQGKRLENDQKTIGIVNGIAAPTRFSVTVNGHADHSGATPMYQRQDALVASAGIITDINHAACTEAVYGTVGTIGKLNVIPNSMNVIPGQVKFSVDIRGIDTDSIQRVVQRLTNSVEKAEKDFGVKIIVQPISAESPVKLDDSICQVIENICQKHDINYMTMLSGAGHDSMNMASLYPTAMIFTPSVAGISHHPDEFTEFSDIAIAADILAETLGVLANQ

Flanking regions ( +/- flanking 50bp)

TTTGTCTCATTTTTTAGACAGTTTTACAGAAAACACCGGAGAATAACCTTATGACTCAACCAATTACAGCAACAGACTTTTCAATTAATGATATGAAAACATTAATTGAAACAATGCAAATTTATAAAAAAGATAACCATGACAAAGGGATAACACGTATTGCCTATAGCGAAGAAGATGAAGCAGCCCATCTCTATCTTGCTAGTGTAATGAAAGAGGCAGGCCTTGAAGTCTATCGTGACGGTATTGGCACACTCTACGCTCGCTTACCGGGGCAAGATAGAACATTACCCGCCGTAGGAACAGGCTCTCACCTTGATACCGTTCCCCAAGGGGGCGCTTATGATGGCGCCTTAGGAGTTATTGCTGGTTTTTATGCTTTGATGCAATACAAACCACAACAACTGAAACGTGATCTAGAGTTAATTGTATTCCGAGCAGAAGAATCGAGCCGATTTGGGTTTTCATGTATCGGAAGTAAAGTGCTAACAGGAAAAATTGACCGTACTCGATGGGAACAAAATAGAGATGATGAAGGTAATAATTTCTTTGATGTTTTAAAATCCCTTGGTTATCAGCATGAAAACTTAGATCAATGTTTACTTAAATCAGACCGTTATAGTGCATTTGTTGAATTACATATTGAACAAGGTAAACGTCTAGAAAACGATCAAAAAACAATTGGAATTGTCAATGGTATCGCTGCGCCAACACGCTTTTCAGTCACCGTAAATGGCCATGCAGACCACTCTGGTGCAACGCCAATGTATCAACGTCAAGATGCGTTAGTGGCGAGTGCGGGTATTATTACTGATATCAATCATGCTGCCTGTACGGAAGCGGTATACGGCACCGTAGGTACCATTGGTAAACTTAATGTCATACCAAACTCGATGAACGTTATTCCAGGGCAAGTAAAATTCTCCGTGGATATTCGTGGTATTGATACGGACAGTATTCAACGTGTTGTACAGCGTTTAACAAACAGTGTTGAGAAAGCAGAAAAAGATTTTGGTGTAAAAATAATAGTGCAACCTATTTCGGCTGAATCACCAGTAAAACTGGATGACTCAATTTGCCAAGTTATTGAAAATATTTGTCAAAAACACGATATCAATTATATGACTATGTTAAGTGGTGCCGGTCATGACTCAATGAATATGGCATCTTTATACCCGACAGCGATGATTTTTACCCCCTCTGTTGCGGGGATTAGTCATCACCCAGATGAATTTACGGAGTTTAGTGATATTGCAATAGCTGCAGATATCTTAGCGGAAACATTAGGTGTTCTAGCTAATCAATAATGACTGATAATCTCTTTTAAGCGTGTAATGGCATCATCATTTTTTATTGC