Orthogroup:group_1864


Homologs in group_1864

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7 homologs were identified in 7 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Source Gene Product
FBDBKF_13940 FBDBKF_13940 Morganella morganii S1 dnaQ DNA polymerase III subunit epsilon
EHELCC_11610 EHELCC_11610 Morganella morganii S2 dnaQ DNA polymerase III subunit epsilon
NLDBIP_11955 NLDBIP_11955 Morganella morganii S4 dnaQ DNA polymerase III subunit epsilon
LHKJJB_11815 LHKJJB_11815 Morganella morganii S3 dnaQ DNA polymerase III subunit epsilon
HKOGLL_10425 HKOGLL_10425 Morganella morganii S5 dnaQ DNA polymerase III subunit epsilon
F4V73_RS12795 F4V73_RS12795 Morganella psychrotolerans dnaQ DNA polymerase III subunit epsilon
PMI_RS01100 PMI_RS01100 Proteus mirabilis HI4320 dnaQ DNA polymerase III subunit epsilon

Distribution of group_1864 homologs

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Number of homologs in each genome (first column and blue bar chart)

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Phylogeny of group_1864 (midpoint rooted)


Phylogeny of the RefSeq best hits of group_1864

Orthogroup content: 7 members

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This page summarizes the annotation of all members of the orthologous group group_1864.
Gene name(s), gene product(s), a summary of protein lenght, and annotations (when available) are provided. Additionally, the number of times (occurence) an annotation is observed in the orthogroup is reported for each annotation.

Orthologs were identified with OrthoFinder. The annotation of orthologous proteins can differ depending the approach used to annotate the source genomes. Automated annotations are also subject to errors. Spurious clustering of non-orthologous proteins can also happen. This page allows to check for eventual inconsistencies.

Gene

# Gene name Occurence
1 dnaQ 7

Product

# Product Occurence
1 DNA polymerase III subunit epsilon 7

COG entry Annotation(s)

ID Occurences Function(s) cat. Function(s) descr. Description
COG0847 7 L Replication, recombination and repair (L) DNA polymerase III, epsilon subunit or related 3'-5' exonuclease

Kegg Ortholog Annotation(s)

KO Occurences Description Pathways Modules
K02342 7 DNA polymerase III subunit epsilon [EC:2.7.7.7] DNA replication
Mismatch repair
Homologous recombination		 -

Pfam domain Annotation(s)

Domain ID Occurences Description
PF00929 7 Exonuclease

Annotations of the 100 SwissProt hits

Annotation Number of occurrences
3'-5' exonuclease DinG 14
DNA polymerase III PolC-type 61
DNA polymerase III polC-type 2
DNA polymerase III subunit epsilon 15
DNA polymerase III subunit epsilon-like protein 1
Exodeoxyribonuclease 10 2
Exonuclease DPD1, chloroplastic/mitochondrial 1
Protein NEN2 1
Putative bifunctional exonuclease/endonuclease protein MT2247 1
Putative bifunctional exonuclease/endonuclease protein Rv2191 1
Uncharacterized exonuclease CP81 1

Protein length

Min length 244
Max length 257
Mean length (sd) 247.0 (5.3)
Median length 244.0

Protein length distribution