Orthogroup:group_1864


Homologs in group_1864

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7 homologs were identified in 7 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Source Gene Product
FBDBKF_13525 FBDBKF_13525 Morganella morganii S1 dapE succinyl-diaminopimelate desuccinylase
EHELCC_08570 EHELCC_08570 Morganella morganii S2 dapE succinyl-diaminopimelate desuccinylase
NLDBIP_08895 NLDBIP_08895 Morganella morganii S4 dapE succinyl-diaminopimelate desuccinylase
LHKJJB_05370 LHKJJB_05370 Morganella morganii S3 dapE succinyl-diaminopimelate desuccinylase
HKOGLL_05545 HKOGLL_05545 Morganella morganii S5 dapE succinyl-diaminopimelate desuccinylase
F4V73_RS03235 F4V73_RS03235 Morganella psychrotolerans dapE succinyl-diaminopimelate desuccinylase
PMI_RS07575 PMI_RS07575 Proteus mirabilis HI4320 dapE succinyl-diaminopimelate desuccinylase

Distribution of group_1864 homologs

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Number of homologs in each genome (first column and blue bar chart)

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Phylogeny of group_1864 (midpoint rooted)


Phylogeny of the RefSeq best hits of group_1864

Orthogroup content: 7 members

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This page summarizes the annotation of all members of the orthologous group group_1864.
Gene name(s), gene product(s), a summary of protein lenght, and annotations (when available) are provided. Additionally, the number of times (occurence) an annotation is observed in the orthogroup is reported for each annotation.

Orthologs were identified with OrthoFinder. The annotation of orthologous proteins can differ depending the approach used to annotate the source genomes. Automated annotations are also subject to errors. Spurious clustering of non-orthologous proteins can also happen. This page allows to check for eventual inconsistencies.

Gene

# Gene name Occurence
1 dapE 7

Product

# Product Occurence
1 succinyl-diaminopimelate desuccinylase 7

COG entry Annotation(s)

ID Occurences Function(s) cat. Function(s) descr. Description
COG0624 7 E Amino acid transport and metabolism (E) Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase or related deacylase

Kegg Ortholog Annotation(s)

Pfam domain Annotation(s)

Domain ID Occurences Description
PF01546 7 Peptidase family M20/M25/M40
PF07687 7 Peptidase dimerisation domain

Annotations of the 511 SwissProt hits

Annotation Number of occurrences
Acetylornithine deacetylase 69
Aminoacylase-1 2
Beta-Ala-His dipeptidase 3
N-fatty-acyl-amino acid synthase/hydrolase PM20D1 4
N-fatty-acyl-amino acid synthase/hydrolase PM20D1.1 1
N-fatty-acyl-amino acid synthase/hydrolase PM20D1.2 1
N-formyl-4-amino-5-aminomethyl-2-methylpyrimidine deformylase 2
Peptidase M20 domain-containing protein SMAC_03666.2 1
Probable carboxypeptidase ACLA_013260 1
Probable carboxypeptidase AFLA_037450 1
Probable carboxypeptidase AN5749 1
Probable carboxypeptidase AO090003000058 1
Probable carboxypeptidase ARB_01041 1
Probable carboxypeptidase ATEG_02905 1
Probable carboxypeptidase BDBG_01803 1
Probable carboxypeptidase BDCG_03757 1
Probable carboxypeptidase HCBG_00059 1
Probable carboxypeptidase MCYG_07204 1
Probable carboxypeptidase MGYG_04702 1
Probable carboxypeptidase NFIA_052450 1
Probable carboxypeptidase PAAG_00768 1
Probable carboxypeptidase PABG_01461 1
Probable carboxypeptidase PADG_04062 1
Probable carboxypeptidase PMAA_093910 1
Probable carboxypeptidase TRV_02791 1
Probable carboxypeptidase UREG_07869 1
Probable di- and tripeptidase DUG2 1
Probable succinyl-diaminopimelate desuccinylase 7
Putative [LysW]-lysine/[LysW]-ornithine hydrolase 2
Succinyl-diaminopimelate desuccinylase 380
Succinyl-diaminopimelate desuccinylase 1 3
Succinyl-diaminopimelate desuccinylase 2 3
Uncharacterized metallohydrolase MJ0457 1
Uncharacterized metallohydrolase MMP1398 1
Uncharacterized metallohydrolase YodQ 1
Uncharacterized protein YgeY 3
[LysW]-lysine/[LysW]-ornithine hydrolase 8

Protein length

Unique protein length 376

Protein length distribution