COG0396


Help to interpret the results

Three outputs have been generated:
General: this result contains the description and frequency of the selected COG entries COG0396, of which KO pathways and KO modules it is part. Additionally, its occurence in the database is reported.
Proteins list: list of occurences of the COG entries within the database. 7 occurences are identified. The table reports the orthogroup, the organism in which each occurrence has been found, and the locus tag enriched by start and stop position, strand, gene name and product.
Clicking on the Ortohgroup name or locus you will be redirected to further info.
Profiles: Phylogenetic tree annotated with
- the presence of the COG entry(ies) of interest within all the genomes of the database (first column)
- the size of the orthogroup(s) in which the reported COG entries has been clustered.
In red the COG entries with positive hit(s) in the corresponding genome.
In green the discrepencies between orthogroup clustering and COG entries prediction. Green homologs (same orthogroup) are not positive hit(s) for the considered COG entries.

Variations within orthogroups may be due to the clustering of multi domain proteins or because of erroneous homolog clustering or COG entries prediction.

Description

Description Fe-S cluster assembly ATPase SufC
Function(s) descr. Posttranslational modification, protein turnover, chaperones (O)

Occurence in the database

COG0396 is associated with 7 different proteins (see tab "Protein list" and "Profile")
The 7 proteins are classified into 1 different orthogroup(s)
# Orthogroup Locus Start Stop S. Gene Product Organism
0 group_1032 FBDBKF_05820 166640 167386 -1 sufC Fe-S cluster assembly ATPase SufC Morganella morganii S1
1 group_1032 EHELCC_11770 14108 14854 1 sufC Fe-S cluster assembly ATPase SufC Morganella morganii S2
2 group_1032 NLDBIP_12110 14063 14809 1 sufC Fe-S cluster assembly ATPase SufC Morganella morganii S4
3 group_1032 LHKJJB_11970 14108 14854 1 sufC Fe-S cluster assembly ATPase SufC Morganella morganii S3
4 group_1032 HKOGLL_10585 14108 14854 1 sufC Fe-S cluster assembly ATPase SufC Morganella morganii S5
5 group_1032 F4V73_RS03505 750073 750819 1 sufC Fe-S cluster assembly ATPase SufC Morganella psychrotolerans
6 group_1032 PMI_RS06840 1493098 1493844 -1 sufC Fe-S cluster assembly ATPase SufC Proteus mirabilis HI4320