COG0028


Help to interpret the results

Three outputs have been generated:
General: this result contains the description and frequency of the selected COG entries COG0028, of which KO pathways and KO modules it is part. Additionally, its occurence in the database is reported.
Proteins list: list of occurences of the COG entries within the database. 34 occurences are identified. The table reports the orthogroup, the organism in which each occurrence has been found, and the locus tag enriched by start and stop position, strand, gene name and product.
Clicking on the Ortohgroup name or locus you will be redirected to further info.
Profiles: Phylogenetic tree annotated with
- the presence of the COG entry(ies) of interest within all the genomes of the database (first column)
- the size of the orthogroup(s) in which the reported COG entries has been clustered.
In red the COG entries with positive hit(s) in the corresponding genome.
In green the discrepencies between orthogroup clustering and COG entries prediction. Green homologs (same orthogroup) are not positive hit(s) for the considered COG entries.

Variations within orthogroups may be due to the clustering of multi domain proteins or because of erroneous homolog clustering or COG entries prediction.

Description

Description Acetolactate synthase large subunit or other thiamine pyrophosphate-requiring enzyme
Function(s) descr. Amino acid transport and metabolism (E)
Coenzyme transport and metabolism (H)

Occurence in the database

COG0028 is associated with 34 different proteins (see tab "Protein list" and "Profile")
The 34 proteins are classified into 3 different orthogroup(s)
# Orthogroup Locus Start Stop S. Gene Product Organism
0 group_8 FBDBKF_04395 68817 70538 -1 ilvI acetolactate synthase 3 large subunit Morganella morganii S1
1 group_8 FBDBKF_08160 5350 7008 1 ilvG acetolactate synthase 2 catalytic subunit Morganella morganii S1
2 group_1616 FBDBKF_10660 98614 100335 1 poxB ubiquinone-dependent pyruvate dehydrogenase Morganella morganii S1
3 group_2908 FBDBKF_13540 84900 86528 -1 mdlC benzoylformate decarboxylase Morganella morganii S1
4 group_8 FBDBKF_17020 32798 34489 -1 ilvB acetolactate synthase large subunit Morganella morganii S1
5 group_8 EHELCC_05685 128274 129995 -1 ilvI acetolactate synthase 3 large subunit Morganella morganii S2
6 group_2908 EHELCC_08555 188663 190291 1 mdlC benzoylformate decarboxylase Morganella morganii S2
7 group_8 EHELCC_13370 156717 158375 -1 ilvG acetolactate synthase 2 catalytic subunit Morganella morganii S2
8 group_1616 EHELCC_14995 98604 100325 1 poxB ubiquinone-dependent pyruvate dehydrogenase Morganella morganii S2
9 group_8 EHELCC_16570 34021 35712 1 ilvB acetolactate synthase large subunit Morganella morganii S2
10 group_8 NLDBIP_06005 169339 171060 -1 ilvI acetolactate synthase 3 large subunit Morganella morganii S4
11 group_2908 NLDBIP_08880 188663 190291 1 mdlC benzoylformate decarboxylase Morganella morganii S4
12 group_8 NLDBIP_13705 156717 158375 -1 ilvG acetolactate synthase 2 catalytic subunit Morganella morganii S4
13 group_1616 NLDBIP_14825 98604 100325 1 poxB ubiquinone-dependent pyruvate dehydrogenase Morganella morganii S4
14 group_8 NLDBIP_16780 34021 35712 1 ilvB acetolactate synthase large subunit Morganella morganii S4
15 group_8 LHKJJB_02885 146863 148584 -1 ilvI acetolactate synthase 3 large subunit Morganella morganii S3
16 group_2908 LHKJJB_05385 66868 68496 -1 mdlC benzoylformate decarboxylase Morganella morganii S3
17 group_8 LHKJJB_12850 4068 5726 1 ilvG acetolactate synthase 2 catalytic subunit Morganella morganii S3
18 group_1616 LHKJJB_14520 41401 43122 -1 poxB ubiquinone-dependent pyruvate dehydrogenase Morganella morganii S3
19 group_8 LHKJJB_16690 32798 34489 -1 ilvB acetolactate synthase large subunit Morganella morganii S3
20 group_2908 HKOGLL_05530 173254 174882 1 mdlC benzoylformate decarboxylase Morganella morganii S5
21 group_8 HKOGLL_06360 68727 70448 -1 ilvI acetolactate synthase 3 large subunit Morganella morganii S5
22 group_8 HKOGLL_12180 156717 158375 -1 ilvG acetolactate synthase 2 catalytic subunit Morganella morganii S5
23 group_1616 HKOGLL_13140 41401 43122 -1 poxB ubiquinone-dependent pyruvate dehydrogenase Morganella morganii S5
24 group_8 HKOGLL_17655 32798 34489 -1 ilvB acetolactate synthase large subunit Morganella morganii S5
25 group_2908 F4V73_RS03220 687129 688757 1 mdlC benzoylformate decarboxylase Morganella psychrotolerans
26 group_8 F4V73_RS08840 1829945 1831666 -1 ilvI acetolactate synthase 3 large subunit Morganella psychrotolerans
27 group_1616 F4V73_RS14370 101597 103318 1 poxB ubiquinone-dependent pyruvate dehydrogenase Morganella psychrotolerans
28 group_8 F4V73_RS18480 31430 33121 -1 ilvB acetolactate synthase large subunit Morganella psychrotolerans
29 group_8 F4V73_RS18690 4316 5962 1 ilvG acetolactate synthase 2 catalytic subunit Morganella psychrotolerans
30 group_8 PMI_RS05145 1123899 1125578 -1 alsS acetolactate synthase AlsS Proteus mirabilis HI4320
31 group_1616 PMI_RS15995 3553868 3555592 1 poxB ubiquinone-dependent pyruvate dehydrogenase Proteus mirabilis HI4320
32 group_8 PMI_RS16400 3615947 3617596 1 ilvG acetolactate synthase 2 catalytic subunit Proteus mirabilis HI4320
33 group_8 PMI_RS17490 3838730 3840424 1 ilvB acetolactate synthase large subunit Proteus mirabilis HI4320