COG0028
Help to interpret the results
Three outputs have been generated:
General: this result contains the description and frequency of the selected COG entries COG0028, of which KO pathways and KO modules it is part. Additionally, its occurence in the database is reported.
Proteins list: list of occurences of the COG entries
within the database. 34 occurences are identified.
The table reports the orthogroup, the organism in which each occurrence has been found, and the locus tag enriched by start and stop position, strand, gene name and product.
Clicking on the Ortohgroup name or locus you will be redirected to further info.
Profiles: Phylogenetic tree annotated with
- the presence of the COG entry(ies) of interest within all the genomes of the database (first column)
- the size of the orthogroup(s) in which the reported COG entries has been clustered.
In red the COG entries with positive hit(s) in the corresponding genome.
In green the discrepencies between orthogroup clustering and COG entries prediction.
Green homologs (same orthogroup) are not positive hit(s) for the considered COG entries.
Variations within orthogroups may be due to the clustering of multi domain proteins or because of erroneous homolog clustering or COG entries prediction.
Description
Description | Acetolactate synthase large subunit or other thiamine pyrophosphate-requiring enzyme |
---|---|
Function(s) descr. | Amino acid transport and metabolism (E) Coenzyme transport and metabolism (H) |
Occurence in the database
COG0028 is associated with 34 different proteins (see tab "Protein list" and "Profile") |
The 34 proteins are classified into 3 different orthogroup(s) |
# | Orthogroup | Locus | Start | Stop | S. | Gene | Product | Organism |
---|---|---|---|---|---|---|---|---|
0 | group_8 | FBDBKF_04395 | 68817 | 70538 | -1 | ilvI | acetolactate synthase 3 large subunit | Morganella morganii S1 |
1 | group_8 | FBDBKF_08160 | 5350 | 7008 | 1 | ilvG | acetolactate synthase 2 catalytic subunit | Morganella morganii S1 |
2 | group_1616 | FBDBKF_10660 | 98614 | 100335 | 1 | poxB | ubiquinone-dependent pyruvate dehydrogenase | Morganella morganii S1 |
3 | group_2908 | FBDBKF_13540 | 84900 | 86528 | -1 | mdlC | benzoylformate decarboxylase | Morganella morganii S1 |
4 | group_8 | FBDBKF_17020 | 32798 | 34489 | -1 | ilvB | acetolactate synthase large subunit | Morganella morganii S1 |
5 | group_8 | EHELCC_05685 | 128274 | 129995 | -1 | ilvI | acetolactate synthase 3 large subunit | Morganella morganii S2 |
6 | group_2908 | EHELCC_08555 | 188663 | 190291 | 1 | mdlC | benzoylformate decarboxylase | Morganella morganii S2 |
7 | group_8 | EHELCC_13370 | 156717 | 158375 | -1 | ilvG | acetolactate synthase 2 catalytic subunit | Morganella morganii S2 |
8 | group_1616 | EHELCC_14995 | 98604 | 100325 | 1 | poxB | ubiquinone-dependent pyruvate dehydrogenase | Morganella morganii S2 |
9 | group_8 | EHELCC_16570 | 34021 | 35712 | 1 | ilvB | acetolactate synthase large subunit | Morganella morganii S2 |
10 | group_8 | NLDBIP_06005 | 169339 | 171060 | -1 | ilvI | acetolactate synthase 3 large subunit | Morganella morganii S4 |
11 | group_2908 | NLDBIP_08880 | 188663 | 190291 | 1 | mdlC | benzoylformate decarboxylase | Morganella morganii S4 |
12 | group_8 | NLDBIP_13705 | 156717 | 158375 | -1 | ilvG | acetolactate synthase 2 catalytic subunit | Morganella morganii S4 |
13 | group_1616 | NLDBIP_14825 | 98604 | 100325 | 1 | poxB | ubiquinone-dependent pyruvate dehydrogenase | Morganella morganii S4 |
14 | group_8 | NLDBIP_16780 | 34021 | 35712 | 1 | ilvB | acetolactate synthase large subunit | Morganella morganii S4 |
15 | group_8 | LHKJJB_02885 | 146863 | 148584 | -1 | ilvI | acetolactate synthase 3 large subunit | Morganella morganii S3 |
16 | group_2908 | LHKJJB_05385 | 66868 | 68496 | -1 | mdlC | benzoylformate decarboxylase | Morganella morganii S3 |
17 | group_8 | LHKJJB_12850 | 4068 | 5726 | 1 | ilvG | acetolactate synthase 2 catalytic subunit | Morganella morganii S3 |
18 | group_1616 | LHKJJB_14520 | 41401 | 43122 | -1 | poxB | ubiquinone-dependent pyruvate dehydrogenase | Morganella morganii S3 |
19 | group_8 | LHKJJB_16690 | 32798 | 34489 | -1 | ilvB | acetolactate synthase large subunit | Morganella morganii S3 |
20 | group_2908 | HKOGLL_05530 | 173254 | 174882 | 1 | mdlC | benzoylformate decarboxylase | Morganella morganii S5 |
21 | group_8 | HKOGLL_06360 | 68727 | 70448 | -1 | ilvI | acetolactate synthase 3 large subunit | Morganella morganii S5 |
22 | group_8 | HKOGLL_12180 | 156717 | 158375 | -1 | ilvG | acetolactate synthase 2 catalytic subunit | Morganella morganii S5 |
23 | group_1616 | HKOGLL_13140 | 41401 | 43122 | -1 | poxB | ubiquinone-dependent pyruvate dehydrogenase | Morganella morganii S5 |
24 | group_8 | HKOGLL_17655 | 32798 | 34489 | -1 | ilvB | acetolactate synthase large subunit | Morganella morganii S5 |
25 | group_2908 | F4V73_RS03220 | 687129 | 688757 | 1 | mdlC | benzoylformate decarboxylase | Morganella psychrotolerans |
26 | group_8 | F4V73_RS08840 | 1829945 | 1831666 | -1 | ilvI | acetolactate synthase 3 large subunit | Morganella psychrotolerans |
27 | group_1616 | F4V73_RS14370 | 101597 | 103318 | 1 | poxB | ubiquinone-dependent pyruvate dehydrogenase | Morganella psychrotolerans |
28 | group_8 | F4V73_RS18480 | 31430 | 33121 | -1 | ilvB | acetolactate synthase large subunit | Morganella psychrotolerans |
29 | group_8 | F4V73_RS18690 | 4316 | 5962 | 1 | ilvG | acetolactate synthase 2 catalytic subunit | Morganella psychrotolerans |
30 | group_8 | PMI_RS05145 | 1123899 | 1125578 | -1 | alsS | acetolactate synthase AlsS | Proteus mirabilis HI4320 |
31 | group_1616 | PMI_RS15995 | 3553868 | 3555592 | 1 | poxB | ubiquinone-dependent pyruvate dehydrogenase | Proteus mirabilis HI4320 |
32 | group_8 | PMI_RS16400 | 3615947 | 3617596 | 1 | ilvG | acetolactate synthase 2 catalytic subunit | Proteus mirabilis HI4320 |
33 | group_8 | PMI_RS17490 | 3838730 | 3840424 | 1 | ilvB | acetolactate synthase large subunit | Proteus mirabilis HI4320 |