Biofilm formation - Pseudomonas aeruginosa
Help to interpret the results
The page contains two contents:
General: this table lists the KO entries and their description specific to this pathway, and provides their frequencies in Morganella psychrotolerans and in the whole dataset.
Profile + homologs: the distribution of the Kegg entries of Biofilm formation - Pseudomonas aeruginosa Kegg pathway is displayed here. Given a Kegg entry and a genome, a red box indicates that one or more loci have been annotated with, while a green box indicates that no locus/loci has(have) been annotated with it, but it/they is/are part of an Orthologous group in which other members have been annotated with that Kegg entry, so it is likely that this copy(ies) also performs this Kegg function.
Check the composition of the Biofilm formation - Pseudomonas aeruginosa pathway
| KO | Description | #in this genome | All occurrences |
|---|---|---|---|
| K01657 | anthranilate synthase component I [EC:4.1.3.27] | 1 | 7 |
| K01658 | anthranilate synthase component II [EC:4.1.3.27] | 1 | 6 |
| K01768 | adenylate cyclase [EC:4.6.1.1] | 0 | 0 |
| K02398 | negative regulator of flagellin synthesis FlgM | 1 | 7 |
| K02405 | RNA polymerase sigma factor FliA | 1 | 7 |
| K02657 | twitching motility two-component system response regulator PilG | 0 | 0 |
| K02658 | twitching motility two-component system response regulator PilH | 0 | 0 |
| K02659 | twitching motility protein PilI | 0 | 0 |
| K02660 | twitching motility protein PilJ | 0 | 0 |
| K03563 | carbon storage regulator | 1 | 7 |
| K03651 | 3',5'-cyclic-AMP phosphodiesterase [EC:3.1.4.53] | 1 | 7 |
| K06596 | chemosensory pili system protein ChpA (sensor histidine kinase/response regulator) | 0 | 0 |
| K06598 | chemosensory pili system protein ChpC | 0 | 0 |
| K07678 | two-component system, NarL family, sensor histidine kinase BarA [EC:2.7.13.3] | 0 | 0 |
| K07689 | two-component system, NarL family, invasion response regulator UvrY | 0 | 0 |
| K10914 | CRP/FNR family transcriptional regulator, cyclic AMP receptor protein | 1 | 7 |
| K10941 | sigma-54 dependent transcriptional regulator, flagellar regulatory protein | 0 | 0 |
| K11444 | two-component system, chemotaxis family, response regulator WspR [EC:2.7.7.65] | 0 | 0 |
| K11890 | type VI secretion system protein ImpM | 0 | 0 |
| K11891 | type VI secretion system protein ImpL | 5 | 11 |
| K11893 | type VI secretion system protein ImpJ | 5 | 11 |
| K11895 | type VI secretion system protein ImpH | 4 | 10 |
| K11900 | type VI secretion system protein ImpC | 5 | 11 |
| K11901 | type VI secretion system protein ImpB | 5 | 11 |
| K11902 | type VI secretion system protein ImpA | 3 | 3 |
| K11903 | type VI secretion system secreted protein Hcp | 5 | 14 |
| K11907 | type VI secretion system protein VasG | 3 | 9 |
| K11912 | serine/threonine-protein kinase PpkA [EC:2.7.11.1] | 0 | 0 |
| K11913 | type VI secretion system protein | 0 | 0 |
| K11915 | serine/threonine protein phosphatase Stp1 [EC:3.1.3.16] | 0 | 0 |
| K12990 | rhamnosyltransferase [EC:2.4.1.-] | 0 | 0 |
| K13060 | acyl homoserine lactone synthase [EC:2.3.1.184] | 0 | 0 |
| K13061 | acyl homoserine lactone synthase [EC:2.3.1.184] | 0 | 0 |
| K13487 | methyl-accepting chemotaxis protein WspA | 0 | 0 |
| K13488 | chemotaxis-related protein WspB | 0 | 0 |
| K13489 | chemotaxis-related protein WspD | 0 | 0 |
| K13490 | two-component system, chemotaxis family, sensor histidine kinase and response regulator WspE | 0 | 0 |
| K13491 | two-component system, chemotaxis family, response regulator WspF [EC:3.1.1.61] | 0 | 0 |
| K16011 | mannose-1-phosphate guanylyltransferase / mannose-6-phosphate isomerase [EC:2.7.7.13 5.3.1.8] | 0 | 0 |
| K17940 | 2-heptyl-3-hydroxy-4(1H)-quinolone synthase [EC:1.14.13.182] | 0 | 0 |
| K18000 | anthranilate-CoA ligase [EC:6.2.1.32] | 0 | 0 |
| K18001 | 2-heptyl-4(1H)-quinolone synthase subunit PqsB [EC:2.3.1.230] | 0 | 0 |
| K18002 | 2-heptyl-4(1H)-quinolone synthase subunit PqsC [EC:2.3.1.230] | 0 | 0 |
| K18003 | anthraniloyl-CoA anthraniloyltransferase [EC:2.3.1.262] | 0 | 0 |
| K18099 | LuxR family transcriptional regulator, quorum-sensing system regulator RhlR | 0 | 0 |
| K18100 | rhamnosyltransferase subunit A [EC:2.4.1.-] | 0 | 0 |
| K18101 | rhamnosyltransferase subunit B [EC:2.4.1.-] | 0 | 0 |
| K18304 | LuxR family transcriptional regulator, quorum-sensing system regulator LasR | 0 | 0 |
| K19291 | mannuronan synthase [EC:2.4.1.33] | 0 | 0 |
| K19735 | LysR family transcriptional regulator, quorum-sensing system regulator MvfR | 0 | 0 |
| K20257 | 2-aminobenzoylacetyl-CoA thioesterase [EC:3.1.2.32] | 0 | 0 |
| K20258 | PA-I galactophilic lectin | 0 | 0 |
| K20259 | PA-IIL fucose-binding lectin | 0 | 0 |
| K20968 | AraC family transcriptional regulator, exoenzyme S synthesis regulatory protein ExsA | 1 | 7 |
| K20969 | small regulatory RNA RsmY | 0 | 0 |
| K20970 | small regulatory RNA RsmZ | 0 | 0 |
| K20971 | two-component system, sensor histidine kinase LadS | 0 | 0 |
| K20972 | two-component system, sensor histidine kinase RetS | 0 | 0 |
| K20973 | two-component system, sensor histidine kinase SagS [EC:2.7.13.3] | 0 | 0 |
| K20974 | two-component system, sensor histidine kinase [EC:2.7.13.3] | 0 | 0 |
| K20975 | two-component system, sensor histidine kinase [EC:2.7.13.3] | 0 | 0 |
| K20976 | histidine phosphotransfer protein HptB | 0 | 0 |
| K20977 | two-component system, HptB-dependent secretion and biofilm response regulator | 0 | 0 |
| K20978 | HptB-dependent secretion and biofilm anti anti-sigma factor | 0 | 0 |
| K20987 | polysaccharide biosynthesis/export protein PslD | 0 | 0 |
| K20997 | polysaccharide biosynthesis protein PslA | 0 | 0 |
| K20998 | polysaccharide biosynthesis protein PslE | 0 | 0 |
| K20999 | polysaccharide biosynthesis protein PslF | 0 | 0 |
| K21000 | polysaccharide biosynthesis protein PslG | 0 | 0 |
| K21001 | polysaccharide biosynthesis protein PslH | 0 | 0 |
| K21002 | polysaccharide biosynthesis protein PslI | 0 | 0 |
| K21003 | polysaccharide biosynthesis protein PslJ | 0 | 0 |
| K21004 | polysaccharide biosynthesis protein PslK | 0 | 0 |
| K21005 | polysaccharide biosynthesis protein PslL | 0 | 0 |
| K21006 | polysaccharide biosynthesis protein PelA | 0 | 0 |
| K21007 | polysaccharide biosynthesis protein PelB | 0 | 0 |
| K21008 | polysaccharide biosynthesis protein PelC | 0 | 0 |
| K21009 | polysaccharide biosynthesis protein PelD | 0 | 0 |
| K21010 | polysaccharide biosynthesis protein PelE | 0 | 0 |
| K21011 | polysaccharide biosynthesis protein PelF | 0 | 0 |
| K21012 | polysaccharide biosynthesis protein PelG | 0 | 0 |
| K21019 | diguanylate cyclase [EC:2.7.7.65] | 0 | 0 |
| K21020 | diguanylate cyclase [EC:2.7.7.65] | 0 | 0 |
| K21021 | diguanylate cyclase [EC:2.7.7.65] | 0 | 0 |
| K21022 | diguanylate cyclase [EC:2.7.7.65] | 0 | 0 |
| K21023 | diguanylate cyclase [EC:2.7.7.65] | 0 | 0 |
| K21024 | c-di-GMP phosphodiesterase [EC:3.1.4.52] | 0 | 0 |
| K21025 | multidomain signaling protein FimX | 0 | 0 |
| K23127 | cyclic-di-GMP-binding protein | 0 | 0 |
| K25205 | polysaccharide biosynthesis protein PslC | 0 | 0 |