K20968


Help to interpret the results

Three outputs have been generated:
General: this result contains the description and frequency of the selected Kegg Orthologs K20968, of which KO pathways and KO modules it is part. Additionally, its occurence in the database is reported.
Proteins list: list of occurences of the Kegg Orthologs within the database. 7 occurences are identified. The table reports the orthogroup, the organism in which each occurrence has been found, and the locus tag enriched by start and stop position, strand, gene name and product.
Clicking on the Ortohgroup name or locus you will be redirected to further info.
Profiles: Phylogenetic tree annotated with
- the presence of the Kegg Ortholog(s) of interest within all the genomes of the database (first column)
- the size of the orthogroup(s) in which the reported Kegg Orthologs has been clustered.
In red the Kegg Orthologs with positive hit(s) in the corresponding genome.
In green the discrepencies between orthogroup clustering and Kegg Orthologs prediction. Green homologs (same orthogroup) are not positive hit(s) for the considered Kegg Orthologs.

Variations within orthogroups may be due to the clustering of multi domain proteins or because of erroneous homolog clustering or Kegg Orthologs prediction.

Description

External link K20968
KO K20968
Description AraC family transcriptional regulator, exoenzyme S synthesis regulatory protein ExsA

KO part of 1 pathways

Biofilm formation - Pseudomonas aeruginosa

KO part of 0 modules

Occurence in the database

K20968 is associated with 7 different proteins (see tab "Protein list" and "Profile")
The 7 proteins are classified into 1 different orthogroup(s)
# Orthogroup Locus Start Stop S. Gene Product Organism
0 group_1647 PMI_RS09670 2109559 2110395 1 AraC family transcriptional regulator Proteus mirabilis HI4320
1 group_1647 FBDBKF_10940 13276 14100 -1 araC AraC-type DNA-binding domain and AraC-containing proteins Morganella morganii S1
2 group_1647 EHELCC_05285 45368 46192 1 araC AraC-type DNA-binding domain and AraC-containing proteins Morganella morganii S2
3 group_1647 NLDBIP_05605 86433 87257 1 araC AraC-type DNA-binding domain and AraC-containing proteins Morganella morganii S4
4 group_1647 LHKJJB_02485 63957 64781 1 araC AraC-type DNA-binding domain and AraC-containing proteins Morganella morganii S3
5 group_1647 HKOGLL_15865 87397 88221 1 araC AraC-type DNA-binding domain and AraC-containing proteins Morganella morganii S5
6 group_1647 F4V73_RS08355 1730493 1731317 1 AraC family transcriptional regulator Morganella psychrotolerans