Orthogroup:group_959


Homologs in group_959

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7 homologs were identified in 7 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Source Gene Product
FBDBKF_05260 FBDBKF_05260 Morganella morganii S1 yciU HI1450 family dsDNA-mimic protein
EHELCC_12330 EHELCC_12330 Morganella morganii S2 yciU HI1450 family dsDNA-mimic protein
NLDBIP_12670 NLDBIP_12670 Morganella morganii S4 yciU HI1450 family dsDNA-mimic protein
LHKJJB_12530 LHKJJB_12530 Morganella morganii S3 yciU HI1450 family dsDNA-mimic protein
HKOGLL_11145 HKOGLL_11145 Morganella morganii S5 yciU HI1450 family dsDNA-mimic protein
F4V73_RS05715 F4V73_RS05715 Morganella psychrotolerans - HI1450 family dsDNA-mimic protein
PMI_RS06555 PMI_RS06555 Proteus mirabilis HI4320 - HI1450 family dsDNA-mimic protein

Distribution of group_959 homologs

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Number of homologs in each genome (first column and blue bar chart)

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Phylogeny of group_959 (midpoint rooted)


Phylogeny of the RefSeq best hits of group_959

Orthogroup content: 7 members

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This page summarizes the annotation of all members of the orthologous group group_959.
Gene name(s), gene product(s), a summary of protein lenght, and annotations (when available) are provided. Additionally, the number of times (occurence) an annotation is observed in the orthogroup is reported for each annotation.

Orthologs were identified with OrthoFinder. The annotation of orthologous proteins can differ depending the approach used to annotate the source genomes. Automated annotations are also subject to errors. Spurious clustering of non-orthologous proteins can also happen. This page allows to check for eventual inconsistencies.

Gene

# Gene name Occurence
1 yciU 5
2 - 2

Product

# Product Occurence
1 HI1450 family dsDNA-mimic protein 7

COG entry Annotation(s)

ID Occurences Function(s) cat. Function(s) descr. Description
COG3099 7 S Function unknown (S) Uncharacterized conserved protein YciU, UPF0263 family

Kegg Ortholog Annotation(s)

KO Occurences Description Pathways Modules
K09901 7 uncharacterized protein - -

Pfam domain Annotation(s)

Domain ID Occurences Description
PF04269 7 Protein of unknown function, DUF440

Annotations of the 65 SwissProt hits

Annotation Number of occurrences
UPF0263 protein APJL_1366 1
UPF0263 protein APL_1348 1
UPF0263 protein APP7_1400 1
UPF0263 protein Asuc_1259 1
UPF0263 protein CGSHiGG_01135 1
UPF0263 protein CKO_01325 1
UPF0263 protein ECA2319 1
UPF0263 protein ESA_01547 1
UPF0263 protein ETA_15890 1
UPF0263 protein Ent638_2296 1
UPF0263 protein HAPS_1002 1
UPF0263 protein HD_0986 1
UPF0263 protein HI_1450 1
UPF0263 protein HSM_1473 1
UPF0263 protein HS_0995 1
UPF0263 protein KPK_2119 1
UPF0263 protein KPN78578_21580 1
UPF0263 protein MS1016 1
UPF0263 protein NTHI1680 1
UPF0263 protein PBPRA1522 1
UPF0263 protein PC1_1990 1
UPF0263 protein PM0536 1
UPF0263 protein Spro_2690 1
UPF0263 protein VC0395_A0828/VC395_1327 1
UPF0263 protein VCM66_1163 1
UPF0263 protein VC_1208 1
UPF0263 protein VIBHAR_02752 1
UPF0263 protein VP1949 1
UPF0263 protein VV1228 1
UPF0263 protein VV1_3059 1
UPF0263 protein YE2228 1
UPF0263 protein YPO2187/y2032/YP_1985 1
UPF0263 protein YPTB2110 1
UPF0263 protein YciU 29
UPF0263 protein YpAngola_A2157 1
UPF0263 protein YpsIP31758_1954 1
UPF0263 protein plu2488 1

Protein length

Min length 94
Max length 110
Mean length (sd) 98.4 (7.6)
Median length 94.0

Protein length distribution